Protein–RNA interactions for Protein: P28335

HTR2C, 5-hydroxytryptamine receptor 2C, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR2CP28335 AP3M2-207ENST00000518421 3669 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR2CP28335 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR2CP28335 PDHA1-212ENST00000540249 3277 ntTSL 2 BASIC12.24□□□□□ -0.45
HTR2CP28335 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
HTR2CP28335 SRGAP3-201ENST00000360413 8415 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HTR2CP28335 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HTR2CP28335 SLC25A26-202ENST00000354883 2673 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
HTR2CP28335 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
HTR2CP28335 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 OPLAH-204ENST00000618853 4031 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 SLC2A14-213ENST00000539924 1873 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
HTR2CP28335 CDH8-201ENST00000299345 3728 ntTSL 5 BASIC12.23□□□□□ -0.45
HTR2CP28335 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.23□□□□□ -0.45
HTR2CP28335 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.23□□□□□ -0.45
HTR2CP28335 PBXIP1-203ENST00000368465 3144 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
HTR2CP28335 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 KRT8P4-201ENST00000509735 1454 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 TLR6-202ENST00000436693 5880 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR2CP28335 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR2CP28335 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
HTR2CP28335 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.23□□□□□ -0.45
HTR2CP28335 AC005229.1-201ENST00000392885 409 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 DGCR5-201ENST00000399539 862 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 SNORA50C-201ENST00000408535 133 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 GGCT-205ENST00000409436 954 ntTSL 3 BASIC12.23□□□□□ -0.45
HTR2CP28335 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR2CP28335 PMS2P2-201ENST00000425039 1128 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 AL157407.1-201ENST00000435784 904 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 AL645933.1-201ENST00000440087 609 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR2CP28335 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC12.23□□□□□ -0.45
HTR2CP28335 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC12.23□□□□□ -0.45
HTR2CP28335 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.23□□□□□ -0.45
HTR2CP28335 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC12.23□□□□□ -0.45
HTR2CP28335 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR2CP28335 AC124068.2-201ENST00000569473 1109 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 RN7SL204P-201ENST00000582831 262 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC12.23□□□□□ -0.45
HTR2CP28335 AC132192.2-201ENST00000596206 1147 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 SNORA50.1-201ENST00000628590 135 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 AC006453.4-201ENST00000636949 1252 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC12.23□□□□□ -0.45
HTR2CP28335 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 RUBCNL-201ENST00000378781 3322 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
HTR2CP28335 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.23□□□□□ -0.45
HTR2CP28335 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR2CP28335 TCF23-201ENST00000296096 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC12.23□□□□□ -0.45
HTR2CP28335 GALNT16-201ENST00000337827 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
HTR2CP28335 AC002350.2-201ENST00000623894 1828 ntBASIC12.23□□□□□ -0.45
HTR2CP28335 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.23□□□□□ -0.45
HTR2CP28335 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 GUCY1B3-205ENST00000505764 2456 ntTSL 2 BASIC12.22□□□□□ -0.45
HTR2CP28335 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.22□□□□□ -0.45
HTR2CP28335 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC12.22□□□□□ -0.45
HTR2CP28335 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HTR2CP28335 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 TMEM192-203ENST00000506087 2225 ntTSL 2 BASIC12.22□□□□□ -0.45
HTR2CP28335 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC12.22□□□□□ -0.45
HTR2CP28335 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 NOBOX-201ENST00000467773 2076 ntTSL 5 BASIC12.22□□□□□ -0.45
HTR2CP28335 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC12.22□□□□□ -0.45
HTR2CP28335 SRRM1-201ENST00000323848 4011 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 ABLIM2-215ENST00000545242 1972 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
HTR2CP28335 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 TMEM41A-201ENST00000296254 1060 ntTSL 2 BASIC12.22□□□□□ -0.45
HTR2CP28335 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HTR2CP28335 AK6-201ENST00000380818 1183 ntTSL 2 BASIC12.22□□□□□ -0.45
HTR2CP28335 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 58.6 ms