Protein–RNA interactions for Protein: Q9Y5F7

PCDHGC4, Protocadherin gamma-C4, humanhuman

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC4Q9Y5F7 ERVK13-1-204ENST00000566343 567 ntTSL 4 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 KRT8P43-201ENST00000406052 1458 ntBASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 STK3-218ENST00000617590 2485 ntTSL 5 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 IKBKB-217ENST00000520810 3086 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 TAGLN2-203ENST00000368097 1604 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
PCDHGC4Q9Y5F7 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 ANKMY1-208ENST00000405002 3304 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 CYB5D2-201ENST00000301391 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 ZC3H4-201ENST00000253048 6119 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 RBP1-205ENST00000492918 1487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 COMMD4-201ENST00000267935 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 CMTM1-201ENST00000328020 981 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 CMTM1-202ENST00000332695 624 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 COMMD4-202ENST00000338995 722 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 CMTM1-205ENST00000379500 1064 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 AL592076.1-201ENST00000424448 303 ntBASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 CMTM1-209ENST00000528324 749 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 CMTM1-217ENST00000533666 493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 KLF17P1-201ENST00000547105 1126 ntBASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 AC009163.3-201ENST00000563554 852 ntTSL 3 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 COMMD4-211ENST00000564815 639 ntTSL 3 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC14.21□□□□□ -0.13
PCDHGC4Q9Y5F7 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
PCDHGC4Q9Y5F7 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGC4Q9Y5F7 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGC4Q9Y5F7 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGC4Q9Y5F7 AC008620.2-201ENST00000510294 1569 ntBASIC14.21□□□□□ -0.14
PCDHGC4Q9Y5F7 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
PCDHGC4Q9Y5F7 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGC4Q9Y5F7 YPEL4-201ENST00000300022 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGC4Q9Y5F7 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGC4Q9Y5F7 AC010096.1-201ENST00000443897 1709 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
PCDHGC4Q9Y5F7 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 AC130686.1-201ENST00000622936 2466 ntBASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 KRT8P19-201ENST00000551916 1455 ntBASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 ARHGEF10-207ENST00000520359 5472 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 GPR68-203ENST00000531499 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 RPP40-201ENST00000319533 1088 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
PCDHGC4Q9Y5F7 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.5 ms