Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC14.63□□□□□ -0.07
ERVFC1P60507 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.63□□□□□ -0.07
ERVFC1P60507 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC14.63□□□□□ -0.07
ERVFC1P60507 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
ERVFC1P60507 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.63□□□□□ -0.07
ERVFC1P60507 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 USP39-207ENST00000450066 2086 ntTSL 2 BASIC14.63□□□□□ -0.07
ERVFC1P60507 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC14.63□□□□□ -0.07
ERVFC1P60507 TRBV5-7-201ENST00000390378 343 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ERVFC1P60507 KRTAP2-3-201ENST00000391418 875 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
ERVFC1P60507 KLHL7-204ENST00000410047 1233 ntTSL 5 BASIC14.63□□□□□ -0.07
ERVFC1P60507 AL137244.1-201ENST00000422931 865 ntBASIC14.63□□□□□ -0.07
ERVFC1P60507 LINC00303-203ENST00000427799 1028 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 AL355482.2-201ENST00000428646 1145 ntTSL 2 BASIC14.63□□□□□ -0.07
ERVFC1P60507 KRT8P30-201ENST00000432100 650 ntBASIC14.63□□□□□ -0.07
ERVFC1P60507 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.63□□□□□ -0.07
ERVFC1P60507 AC133141.1-201ENST00000443015 339 ntBASIC14.63□□□□□ -0.07
ERVFC1P60507 PILRA-205ENST00000453419 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 AC079250.1-201ENST00000456046 531 ntBASIC14.63□□□□□ -0.07
ERVFC1P60507 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC14.63□□□□□ -0.07
ERVFC1P60507 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC14.63□□□□□ -0.07
ERVFC1P60507 AL139316.1-201ENST00000555643 568 ntTSL 3 BASIC14.63□□□□□ -0.07
ERVFC1P60507 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.63□□□□□ -0.07
ERVFC1P60507 PTPN20CP-201ENST00000614090 920 ntBASIC14.63□□□□□ -0.07
ERVFC1P60507 AC026120.2-201ENST00000617239 309 ntBASIC14.63□□□□□ -0.07
ERVFC1P60507 AC048382.6-201ENST00000621980 1223 ntBASIC14.63□□□□□ -0.07
ERVFC1P60507 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.63□□□□□ -0.07
ERVFC1P60507 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC14.63□□□□□ -0.07
ERVFC1P60507 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC14.63□□□□□ -0.07
ERVFC1P60507 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ERVFC1P60507 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
ERVFC1P60507 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.63□□□□□ -0.07
ERVFC1P60507 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
ERVFC1P60507 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
ERVFC1P60507 NORAD-201ENST00000565493 5339 ntBASIC14.62□□□□□ -0.07
ERVFC1P60507 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 SHISA5-206ENST00000426002 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.62□□□□□ -0.07
ERVFC1P60507 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 GH1-203ENST00000351388 685 ntTSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 HDGF-202ENST00000368206 960 ntTSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 CCL19-202ENST00000378800 414 ntTSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 MPV17-207ENST00000403262 665 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 PGK1P2-201ENST00000431702 1214 ntBASIC14.62□□□□□ -0.07
ERVFC1P60507 AL121987.1-201ENST00000435580 645 ntTSL 3 BASIC14.62□□□□□ -0.07
ERVFC1P60507 LINC00399-201ENST00000439008 414 ntTSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 KRT19P4-201ENST00000443208 943 ntBASIC14.62□□□□□ -0.07
ERVFC1P60507 HNRNPA1P42-201ENST00000458678 957 ntBASIC14.62□□□□□ -0.07
ERVFC1P60507 TCEAL4-206ENST00000468024 1135 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 WNT5A-205ENST00000497027 1299 ntTSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC14.62□□□□□ -0.07
ERVFC1P60507 C11orf58-207ENST00000525684 575 ntTSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 C11orf58-209ENST00000528634 776 ntTSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC14.62□□□□□ -0.07
ERVFC1P60507 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 FAM187B2P-201ENST00000577135 713 ntBASIC14.62□□□□□ -0.07
ERVFC1P60507 RBFOX3-206ENST00000582043 1143 ntTSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 PRMT1P1-201ENST00000604252 1009 ntBASIC14.62□□□□□ -0.07
ERVFC1P60507 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 MECP2-213ENST00000622433 1071 ntTSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 BX322534.1-201ENST00000635574 241 ntBASIC14.62□□□□□ -0.07
ERVFC1P60507 AC215524.1-201ENST00000635696 241 ntBASIC14.62□□□□□ -0.07
ERVFC1P60507 GNG14-201ENST00000640117 210 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 FLJ16779-201ENST00000612722 7638 ntBASIC14.62□□□□□ -0.07
ERVFC1P60507 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.62□□□□□ -0.07
ERVFC1P60507 AC015656.1-201ENST00000624209 3578 ntBASIC14.62□□□□□ -0.07
ERVFC1P60507 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
ERVFC1P60507 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
ERVFC1P60507 FAM226B-201ENST00000602508 1490 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 73.1 ms