Protein–RNA interactions for Protein: P49459

UBE2A, Ubiquitin-conjugating enzyme E2 A, humanhuman

Predictions only

Length 152 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2AP49459 C19orf57-204ENST00000586783 2454 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
UBE2AP49459 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 TRAPPC9-201ENST00000389328 4474 ntTSL 2 BASIC9.04□□□□□ -0.96
UBE2AP49459 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
UBE2AP49459 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC9.04□□□□□ -0.96
UBE2AP49459 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 AC092933.1-201ENST00000393644 945 ntBASIC9.04□□□□□ -0.96
UBE2AP49459 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 TCF20-203ENST00000404876 1058 ntTSL 3 BASIC9.04□□□□□ -0.96
UBE2AP49459 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
UBE2AP49459 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC9.04□□□□□ -0.96
UBE2AP49459 SKA2-202ENST00000437036 625 ntTSL 2 BASIC9.04□□□□□ -0.96
UBE2AP49459 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC9.04□□□□□ -0.96
UBE2AP49459 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC9.04□□□□□ -0.96
UBE2AP49459 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC9.04□□□□□ -0.96
UBE2AP49459 USP32P1-208ENST00000506594 1164 ntBASIC9.04□□□□□ -0.96
UBE2AP49459 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC9.04□□□□□ -0.96
UBE2AP49459 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC9.04□□□□□ -0.96
UBE2AP49459 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC9.04□□□□□ -0.96
UBE2AP49459 FUZ-207ENST00000526575 482 ntTSL 4 BASIC9.04□□□□□ -0.96
UBE2AP49459 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC9.04□□□□□ -0.96
UBE2AP49459 AC078819.1-201ENST00000547454 765 ntBASIC9.04□□□□□ -0.96
UBE2AP49459 AC012085.1-201ENST00000548270 765 ntBASIC9.04□□□□□ -0.96
UBE2AP49459 KRT90P-201ENST00000549264 1064 ntBASIC9.04□□□□□ -0.96
UBE2AP49459 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC9.04□□□□□ -0.96
UBE2AP49459 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC9.04□□□□□ -0.96
UBE2AP49459 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC9.04□□□□□ -0.96
UBE2AP49459 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC9.04□□□□□ -0.96
UBE2AP49459 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC9.04□□□□□ -0.96
UBE2AP49459 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC9.04□□□□□ -0.96
UBE2AP49459 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC9.04□□□□□ -0.96
UBE2AP49459 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC9.04□□□□□ -0.96
UBE2AP49459 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
UBE2AP49459 HSPA8P5-201ENST00000456928 2069 ntBASIC9.04□□□□□ -0.96
UBE2AP49459 AC009093.2-202ENST00000620513 2079 ntBASIC9.04□□□□□ -0.96
UBE2AP49459 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC9.04□□□□□ -0.96
UBE2AP49459 SCN4A-201ENST00000435607 7805 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 AMBRA1-201ENST00000314845 5023 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC9.04□□□□□ -0.96
UBE2AP49459 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC9.04□□□□□ -0.96
UBE2AP49459 SYNPO-202ENST00000394243 7063 ntAPPRIS ALT2 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 CASP8AP2-205ENST00000551025 6151 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC9.04□□□□□ -0.96
UBE2AP49459 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
UBE2AP49459 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC9.04□□□□□ -0.96
UBE2AP49459 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC9.04□□□□□ -0.96
UBE2AP49459 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC9.04□□□□□ -0.96
UBE2AP49459 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC9.04□□□□□ -0.96
UBE2AP49459 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 ZNF180-201ENST00000221327 4335 ntAPPRIS P3 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC9.04□□□□□ -0.96
UBE2AP49459 ARHGAP33-204ENST00000378944 4219 ntAPPRIS ALT2 TSL 2 BASIC9.04□□□□□ -0.96
UBE2AP49459 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 KRT8P24-201ENST00000560290 1559 ntBASIC9.03□□□□□ -0.96
UBE2AP49459 CARMN-210ENST00000602964 8398 ntTSL 2 BASIC9.03□□□□□ -0.96
UBE2AP49459 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC9.03□□□□□ -0.96
UBE2AP49459 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
UBE2AP49459 PDP2-201ENST00000311765 7146 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC9.03□□□□□ -0.96
UBE2AP49459 CCT8L2-201ENST00000359963 2060 ntAPPRIS P1 BASIC9.03□□□□□ -0.96
UBE2AP49459 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC9.03□□□□□ -0.96
UBE2AP49459 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC9.03□□□□□ -0.96
UBE2AP49459 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 MAGEA4-201ENST00000276344 1724 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
UBE2AP49459 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC9.03□□□□□ -0.96
UBE2AP49459 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC9.03□□□□□ -0.96
UBE2AP49459 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC9.03□□□□□ -0.96
UBE2AP49459 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 PLXNA4-202ENST00000359827 13786 ntAPPRIS P1 TSL 5 BASIC9.03□□□□□ -0.96
UBE2AP49459 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC9.03□□□□□ -0.96
UBE2AP49459 BOLA2P3-201ENST00000404566 256 ntBASIC9.03□□□□□ -0.96
UBE2AP49459 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC9.03□□□□□ -0.96
UBE2AP49459 P3H2-AS1-201ENST00000412203 730 ntTSL 5 BASIC9.03□□□□□ -0.96
UBE2AP49459 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC9.03□□□□□ -0.96
UBE2AP49459 TMEM14DP-201ENST00000422205 345 ntBASIC9.03□□□□□ -0.96
UBE2AP49459 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC9.03□□□□□ -0.96
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms