Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
CCNB3Q8WWL7 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC21.34■■□□□ 1.01
CCNB3Q8WWL7 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
CCNB3Q8WWL7 LAMP5-202ENST00000427562 1309 ntTSL 2 BASIC21.33■■□□□ 1.01
CCNB3Q8WWL7 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
CCNB3Q8WWL7 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNB3Q8WWL7 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNB3Q8WWL7 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1.01
CCNB3Q8WWL7 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNB3Q8WWL7 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNB3Q8WWL7 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1.01
CCNB3Q8WWL7 SALL4P6-201ENST00000429385 1691 ntBASIC21.33■■□□□ 1.01
CCNB3Q8WWL7 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
CCNB3Q8WWL7 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
CCNB3Q8WWL7 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
CCNB3Q8WWL7 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC21.33■■□□□ 1
CCNB3Q8WWL7 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC21.33■■□□□ 1
CCNB3Q8WWL7 VENTXP4-201ENST00000449029 958 ntBASIC21.33■■□□□ 1
CCNB3Q8WWL7 AL451000.1-201ENST00000451300 1186 ntBASIC21.33■■□□□ 1
CCNB3Q8WWL7 AC011995.2-201ENST00000452701 574 ntTSL 4 BASIC21.33■■□□□ 1
CCNB3Q8WWL7 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC21.33■■□□□ 1
CCNB3Q8WWL7 RPAIN-205ENST00000536255 1057 ntTSL 1 (best) BASIC21.33■■□□□ 1
CCNB3Q8WWL7 AC023968.2-201ENST00000560593 1049 ntBASIC21.33■■□□□ 1
CCNB3Q8WWL7 MIR4326-201ENST00000582203 59 ntBASIC21.33■■□□□ 1
CCNB3Q8WWL7 TYMSP2-201ENST00000589501 424 ntBASIC21.33■■□□□ 1
CCNB3Q8WWL7 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC21.33■■□□□ 1
CCNB3Q8WWL7 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC21.33■■□□□ 1
CCNB3Q8WWL7 MIR8071-1-201ENST00000616769 65 ntBASIC21.33■■□□□ 1
CCNB3Q8WWL7 MIR8071-2-201ENST00000616772 65 ntBASIC21.33■■□□□ 1
CCNB3Q8WWL7 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC21.33■■□□□ 1
CCNB3Q8WWL7 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC21.33■■□□□ 1
CCNB3Q8WWL7 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 CDK20-201ENST00000325303 2175 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 ZFP64-203ENST00000361387 2545 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 GAPDH-204ENST00000396859 1256 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 SIX3-AS1-201ENST00000419364 844 ntTSL 2 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 PSMA6-217ENST00000628955 364 ntTSL 5 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 ESR1-214ENST00000638569 132 ntTSL 5 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 AL139424.3-202ENST00000641619 917 ntBASIC21.32■■□□□ 1
CCNB3Q8WWL7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
CCNB3Q8WWL7 SFXN4-201ENST00000355697 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CCNB3Q8WWL7 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 FTSJ1-203ENST00000396894 1669 ntTSL 2 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 ZNF286A-201ENST00000395893 654 ntTSL 3 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 SERF2-206ENST00000409291 807 ntTSL 3 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 LRRC3-AS1-201ENST00000426578 784 ntTSL 3 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 NALT1-202ENST00000450304 437 ntTSL 3 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 CASP3-205ENST00000517513 964 ntTSL 5 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 LINC02252-201ENST00000565706 487 ntTSL 3 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 KRT18P8-201ENST00000581937 1246 ntBASIC21.31■■□□□ 1
CCNB3Q8WWL7 RNF103-CHMP3-202ENST00000604011 1135 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 Metazoa_SRP.200-201ENST00000622073 282 ntBASIC21.31■■□□□ 1
CCNB3Q8WWL7 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 GRK6P1-201ENST00000400595 1711 ntBASIC21.31■■□□□ 1
CCNB3Q8WWL7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC21.31■■□□□ 1
CCNB3Q8WWL7 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC21.31■■□□□ 1
CCNB3Q8WWL7 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms