Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 PHACTR2-202ENST00000367582 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC13.57□□□□□ -0.24
RNF44Q7L0R7 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 LDLRAD4-203ENST00000399848 8633 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 AC067931.2-201ENST00000623655 2003 ntBASIC13.56□□□□□ -0.24
RNF44Q7L0R7 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 IGHV3-48-201ENST00000390624 432 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 AL391832.2-201ENST00000418557 889 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 IGLV3-15-201ENST00000518356 244 ntBASIC13.56□□□□□ -0.24
RNF44Q7L0R7 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 NDUFB10P1-201ENST00000567319 521 ntBASIC13.56□□□□□ -0.24
RNF44Q7L0R7 AC005726.2-204ENST00000577790 511 ntAPPRIS ALT2 TSL 4 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 AC007326.1-201ENST00000604539 458 ntBASIC13.56□□□□□ -0.24
RNF44Q7L0R7 LINC01726-201ENST00000624692 1253 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 ZNF785-202ENST00000470110 2867 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
RNF44Q7L0R7 USP39-207ENST00000450066 2086 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 PTK7-203ENST00000345201 4071 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 NEU3-201ENST00000294064 6728 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 PKIG-201ENST00000349959 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 AL807761.2-201ENST00000422849 729 ntBASIC13.55□□□□□ -0.24
RNF44Q7L0R7 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 FTH1P22-201ENST00000456305 520 ntBASIC13.55□□□□□ -0.24
RNF44Q7L0R7 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 LINC01598-205ENST00000508763 719 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 AC005740.1-201ENST00000515639 522 ntBASIC13.55□□□□□ -0.24
RNF44Q7L0R7 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 SIGLEC18P-201ENST00000602271 909 ntBASIC13.55□□□□□ -0.24
RNF44Q7L0R7 AL133467.4-201ENST00000602953 725 ntBASIC13.55□□□□□ -0.24
RNF44Q7L0R7 AL606495.2-201ENST00000605867 535 ntBASIC13.55□□□□□ -0.24
RNF44Q7L0R7 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC13.55□□□□□ -0.24
RNF44Q7L0R7 AC009560.1-201ENST00000620208 434 ntBASIC13.55□□□□□ -0.24
RNF44Q7L0R7 AC007718.1-201ENST00000621078 280 ntBASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms