Protein–RNA interactions for Protein: P49918

CDKN1C, Cyclin-dependent kinase inhibitor 1C, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1CP49918 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN1CP49918 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN1CP49918 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN1CP49918 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN1CP49918 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC14.03□□□□□ -0.16
CDKN1CP49918 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
CDKN1CP49918 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
CDKN1CP49918 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC14.03□□□□□ -0.16
CDKN1CP49918 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN1CP49918 GPAT4-201ENST00000396987 6298 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CDKN1CP49918 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN1CP49918 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CDKN1CP49918 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CDKN1CP49918 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN1CP49918 AC005562.1-201ENST00000583030 3219 ntBASIC14.02□□□□□ -0.16
CDKN1CP49918 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN1CP49918 RNASEH2C-201ENST00000308418 2794 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN1CP49918 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN1CP49918 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN1CP49918 ZSCAN16-AS1-201ENST00000600652 2163 ntTSL 2 BASIC14.02□□□□□ -0.16
CDKN1CP49918 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN1CP49918 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN1CP49918 FMO6P-201ENST00000236166 1620 ntBASIC14.02□□□□□ -0.16
CDKN1CP49918 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CDKN1CP49918 KCNIP1-210ENST00000636734 1613 ntTSL 5 BASIC14.02□□□□□ -0.16
CDKN1CP49918 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.02□□□□□ -0.16
CDKN1CP49918 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC14.02□□□□□ -0.16
CDKN1CP49918 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC14.02□□□□□ -0.16
CDKN1CP49918 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDKN1CP49918 RSBN1-204ENST00000612242 6592 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CDKN1CP49918 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDKN1CP49918 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDKN1CP49918 MIR769-201ENST00000390225 118 ntBASIC14.02□□□□□ -0.17
CDKN1CP49918 ELK2AP-201ENST00000392510 1007 ntBASIC14.02□□□□□ -0.17
CDKN1CP49918 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.02□□□□□ -0.17
CDKN1CP49918 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CDKN1CP49918 NAGK-204ENST00000443872 878 ntTSL 3 BASIC14.02□□□□□ -0.17
CDKN1CP49918 PHBP15-201ENST00000574228 665 ntBASIC14.02□□□□□ -0.17
CDKN1CP49918 AP001505.2-201ENST00000616815 443 ntBASIC14.02□□□□□ -0.17
CDKN1CP49918 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.02□□□□□ -0.17
CDKN1CP49918 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.02□□□□□ -0.17
CDKN1CP49918 AC079781.5-202ENST00000641784 3743 ntBASIC14.02□□□□□ -0.17
CDKN1CP49918 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.02□□□□□ -0.17
CDKN1CP49918 INMT-201ENST00000013222 2559 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDKN1CP49918 KCTD18-202ENST00000409157 2556 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDKN1CP49918 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CDKN1CP49918 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
CDKN1CP49918 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.02□□□□□ -0.17
CDKN1CP49918 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC14.02□□□□□ -0.17
CDKN1CP49918 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 AL591122.2-201ENST00000624125 1853 ntBASIC14.01□□□□□ -0.17
CDKN1CP49918 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 MARK2P9-201ENST00000430958 1727 ntBASIC14.01□□□□□ -0.17
CDKN1CP49918 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC14.01□□□□□ -0.17
CDKN1CP49918 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.01□□□□□ -0.17
CDKN1CP49918 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC14.01□□□□□ -0.17
CDKN1CP49918 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC14.01□□□□□ -0.17
CDKN1CP49918 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC14.01□□□□□ -0.17
CDKN1CP49918 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC14.01□□□□□ -0.17
CDKN1CP49918 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CDKN1CP49918 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC14.01□□□□□ -0.17
CDKN1CP49918 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CDKN1CP49918 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CDKN1CP49918 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.01□□□□□ -0.17
CDKN1CP49918 OR2K2-202ENST00000374428 1038 ntBASIC14.01□□□□□ -0.17
CDKN1CP49918 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 MEMO1-204ENST00000407893 682 ntTSL 5 BASIC14.01□□□□□ -0.17
CDKN1CP49918 LY6G6E-227ENST00000409239 776 ntAPPRIS ALT2 TSL 4 BASIC14.01□□□□□ -0.17
CDKN1CP49918 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC14.01□□□□□ -0.17
CDKN1CP49918 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC14.01□□□□□ -0.17
CDKN1CP49918 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CDKN1CP49918 Z97180.1-201ENST00000445173 988 ntBASIC14.01□□□□□ -0.17
CDKN1CP49918 RPSAP15-201ENST00000448168 861 ntBASIC14.01□□□□□ -0.17
CDKN1CP49918 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC14.01□□□□□ -0.17
CDKN1CP49918 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.01□□□□□ -0.17
CDKN1CP49918 POU5F1P2-201ENST00000521750 823 ntBASIC14.01□□□□□ -0.17
CDKN1CP49918 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.01□□□□□ -0.17
CDKN1CP49918 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CDKN1CP49918 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC14.01□□□□□ -0.17
CDKN1CP49918 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC14.01□□□□□ -0.17
CDKN1CP49918 RN7SL574P-201ENST00000581512 297 ntBASIC14.01□□□□□ -0.17
CDKN1CP49918 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CDKN1CP49918 IRF3-215ENST00000596822 823 ntTSL 3 BASIC14.01□□□□□ -0.17
CDKN1CP49918 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC14.01□□□□□ -0.17
CDKN1CP49918 CR392039.2-201ENST00000623182 509 ntBASIC14.01□□□□□ -0.17
CDKN1CP49918 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC14.01□□□□□ -0.17
CDKN1CP49918 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CDKN1CP49918 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC14.01□□□□□ -0.17
CDKN1CP49918 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
CDKN1CP49918 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms