Protein–RNA interactions for Protein: P48539

PCP4, Calmodulin regulator protein PCP4, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCP4P48539 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC9.02□□□□□ -0.96
PCP4P48539 HDLBP-201ENST00000310931 4571 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.96
PCP4P48539 KANK1-210ENST00000619269 5688 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
PCP4P48539 KIAA0355-201ENST00000299505 6717 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 HSPA4L-201ENST00000296464 10790 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
PCP4P48539 AL662907.1-201ENST00000622988 1360 ntBASIC9.02□□□□□ -0.97
PCP4P48539 HCG18-236ENST00000438412 2440 ntTSL 2 BASIC9.02□□□□□ -0.97
PCP4P48539 CLIP1-203ENST00000361654 5568 ntTSL 5 BASIC9.02□□□□□ -0.97
PCP4P48539 FAM86EP-201ENST00000313946 2845 ntTSL 2 BASIC9.02□□□□□ -0.97
PCP4P48539 RPL32P3-206ENST00000510078 2161 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 CUX1-221ENST00000622516 2990 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 TTC31-202ENST00000410003 3358 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 AC021305.1-201ENST00000520656 1514 ntBASIC9.02□□□□□ -0.97
PCP4P48539 FAM196A-203ENST00000614311 4335 ntTSL 5 BASIC9.02□□□□□ -0.97
PCP4P48539 ST8SIA3-201ENST00000324000 11833 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 PGM2-201ENST00000381967 3264 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 ST7L-203ENST00000360743 4206 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 STX17-AS1-201ENST00000529965 548 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC9.02□□□□□ -0.97
PCP4P48539 PNMT-203ENST00000581428 677 ntTSL 2 BASIC9.02□□□□□ -0.97
PCP4P48539 C13orf42-202ENST00000563710 3010 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
PCP4P48539 RFX2-202ENST00000359161 3595 ntAPPRIS P4 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC9.02□□□□□ -0.97
PCP4P48539 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 LINC00167-201ENST00000530583 1419 ntBASIC9.02□□□□□ -0.97
PCP4P48539 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC9.02□□□□□ -0.97
PCP4P48539 SRC-201ENST00000358208 3851 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 AC010487.3-201ENST00000634278 1966 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
PCP4P48539 GPR182-201ENST00000300098 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 COL6A3-204ENST00000392003 3464 ntTSL 2 BASIC9.02□□□□□ -0.97
PCP4P48539 ANP32E-208ENST00000583931 3451 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 AC002090.1-201ENST00000625000 2138 ntBASIC9.02□□□□□ -0.97
PCP4P48539 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 APTX-207ENST00000397172 1740 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC9.02□□□□□ -0.97
PCP4P48539 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC9.02□□□□□ -0.97
PCP4P48539 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 WWC1-209ENST00000521089 3562 ntAPPRIS ALT1 TSL 2 BASIC9.02□□□□□ -0.97
PCP4P48539 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC9.02□□□□□ -0.97
PCP4P48539 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC9.02□□□□□ -0.97
PCP4P48539 SPATA13-204ENST00000399949 3026 ntAPPRIS ALT2 TSL 2 BASIC9.02□□□□□ -0.97
PCP4P48539 SLC11A2-209ENST00000547198 2486 ntAPPRIS ALT1 TSL 1 (best) BASIC9.02□□□□□ -0.97
PCP4P48539 STX16-203ENST00000358029 4329 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 ROBO2-202ENST00000461745 8946 ntAPPRIS P2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 C3orf14-206ENST00000494481 3525 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 PNPT1-205ENST00000447944 4411 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 AC119674.2-203ENST00000642129 1675 ntAPPRIS P5 BASIC9.01□□□□□ -0.97
PCP4P48539 HK1-206ENST00000448642 3868 ntTSL 5 BASIC9.01□□□□□ -0.97
PCP4P48539 NANOGP1-202ENST00000607111 1982 ntTSL 5 BASIC9.01□□□□□ -0.97
PCP4P48539 INPP5F-201ENST00000361976 5063 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 AP005060.1-201ENST00000623868 3174 ntBASIC9.01□□□□□ -0.97
PCP4P48539 PTPRN-204ENST00000423636 3313 ntAPPRIS ALT2 TSL 2 BASIC9.01□□□□□ -0.97
PCP4P48539 SYTL2-201ENST00000316356 4293 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
PCP4P48539 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 PSMF1-203ENST00000335877 4290 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC9.01□□□□□ -0.97
PCP4P48539 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 TGOLN2-206ENST00000444342 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 EIF2A-203ENST00000460851 2198 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC9.01□□□□□ -0.97
PCP4P48539 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC9.01□□□□□ -0.97
PCP4P48539 TALDO1-203ENST00000528097 1231 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC9.01□□□□□ -0.97
PCP4P48539 AL033527.3-201ENST00000566366 1196 ntBASIC9.01□□□□□ -0.97
PCP4P48539 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC9.01□□□□□ -0.97
PCP4P48539 SKA2-207ENST00000583380 583 ntTSL 5 BASIC9.01□□□□□ -0.97
PCP4P48539 AL121672.3-201ENST00000608644 468 ntBASIC9.01□□□□□ -0.97
PCP4P48539 JADE1-213ENST00000610919 5644 ntAPPRIS P3 TSL 5 BASIC9.01□□□□□ -0.97
PCP4P48539 ADSL-220ENST00000636714 1734 ntAPPRIS ALT1 TSL 5 BASIC9.01□□□□□ -0.97
PCP4P48539 CLIP1-201ENST00000302528 5833 ntAPPRIS P4 TSL 5 BASIC9.01□□□□□ -0.97
PCP4P48539 AC244034.3-201ENST00000624347 3135 ntBASIC9.01□□□□□ -0.97
PCP4P48539 CAPRIN1-209ENST00000530820 3454 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
PCP4P48539 FBXO44-206ENST00000376770 3320 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 AL138889.1-203ENST00000530000 6593 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 ROPN1-201ENST00000184183 1614 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC9.01□□□□□ -0.97
PCP4P48539 AC008870.1-201ENST00000566996 3009 ntTSL 2 BASIC9.01□□□□□ -0.97
PCP4P48539 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 LCA5L-202ENST00000358268 2564 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 TP53-206ENST00000455263 2580 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 TP53-219ENST00000610538 2580 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 CLDN18-201ENST00000183605 3520 ntAPPRIS P3 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 CTPS2-202ENST00000380241 3526 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC9.01□□□□□ -0.97
PCP4P48539 HMGN3-AS1-201ENST00000604516 2946 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 RPL4-201ENST00000307961 2769 ntAPPRIS P1 TSL 1 (best) BASIC9.01□□□□□ -0.97
PCP4P48539 AC091173.1-201ENST00000505627 2750 ntTSL 1 (best) BASIC9.01□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms