RNA–Protein interactions for RNA: ENST00000447944.6

PNPT1-205, Transcript of polyribonucleotide nucleotidyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNPT1, Length 4,411 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNPT1-205ENST00000447944 NISCHQ9Y2I1 1504 aa17.16■□□□□ 0.34
PNPT1-205ENST00000447944 SUPT5HO00267 1087 aaKnown RBP17.05■□□□□ 0.32
PNPT1-205ENST00000447944 DCAF8L2P0C7V8 631 aa16.93■□□□□ 0.3
PNPT1-205ENST00000447944 SHROOM4Q9ULL8 1493 aa16.76■□□□□ 0.27
PNPT1-205ENST00000447944 PCGF6Q9BYE7 350 aa16.64■□□□□ 0.25
PNPT1-205ENST00000447944 EHMT2Q96KQ7 1210 aa16.37■□□□□ 0.21
PNPT1-205ENST00000447944 HRCP23327 699 aa16.26■□□□□ 0.19
PNPT1-205ENST00000447944 PELP1Q8IZL8 1130 aaKnown RBP16.22■□□□□ 0.19
PNPT1-205ENST00000447944 PPARGC1BQ86YN6 1023 aaKnown RBP16.15■□□□□ 0.18
PNPT1-205ENST00000447944 FAM9AQ8IZU1 332 aaPredicted RBP16.02■□□□□ 0.16
PNPT1-205ENST00000447944 ZEB1P37275 1124 aaPredicted RBP15.91■□□□□ 0.14
PNPT1-205ENST00000447944 TTBK1Q5TCY1 1321 aaPredicted RBP15.89■□□□□ 0.13
PNPT1-205ENST00000447944 CENPBP07199 599 aaPredicted RBP15.88■□□□□ 0.13
PNPT1-205ENST00000447944 CCER1Q8TC90 406 aaPredicted RBP15.78■□□□□ 0.12
PNPT1-205ENST00000447944 LOC105371045A0A1W2PR82 267 aa15.78■□□□□ 0.12
PNPT1-205ENST00000447944 TRIM26Q12899 539 aaPredicted RBP15.76■□□□□ 0.11
PNPT1-205ENST00000447944 MYT1Q01538 1121 aa15.76■□□□□ 0.11
PNPT1-205ENST00000447944 CHIC1Q5VXU3 224 aa15.75■□□□□ 0.11
PNPT1-205ENST00000447944 YTHDC1Q96MU7 727 aaKnown RBP15.73■□□□□ 0.11
PNPT1-205ENST00000447944 TRIM41Q8WV44 630 aa15.62■□□□□ 0.09
PNPT1-205ENST00000447944 APLP2Q06481 763 aa15.41■□□□□ 0.06
PNPT1-205ENST00000447944 GTF3C3Q9Y5Q9 886 aa15.39■□□□□ 0.05
PNPT1-205ENST00000447944 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.37■□□□□ 0.05
PNPT1-205ENST00000447944 DIEXFQ68CQ4 756 aaKnown RBP15.33■□□□□ 0.04
PNPT1-205ENST00000447944 RANGAP1P46060 587 aaPredicted RBP15.32■□□□□ 0.04
PNPT1-205ENST00000447944 ERICH6Q7L0X2 663 aa15.28■□□□□ 0.04
PNPT1-205ENST00000447944 SCAF1Q9H7N4 1312 aaKnown RBP15.26■□□□□ 0.03
PNPT1-205ENST00000447944 ACIN1Q9UKV3 1341 aaKnown RBP15.23■□□□□ 0.03
PNPT1-205ENST00000447944 UBTFP17480 764 aaKnown RBP15.21■□□□□ 0.03
PNPT1-205ENST00000447944 NEFLP07196 543 aa15.12■□□□□ 0.01
PNPT1-205ENST00000447944 NEUROD1Q13562 356 aa15.09■□□□□ 0.01
PNPT1-205ENST00000447944 HNRNPUL2Q1KMD3 747 aaKnown RBP15.09■□□□□ 0.01
PNPT1-205ENST00000447944 MYO15BQ96JP2 1530 aa14.99□□□□□ -0.01
PNPT1-205ENST00000447944 BCANQ96GW7 911 aa14.93□□□□□ -0.02
PNPT1-205ENST00000447944 DCAF1Q9Y4B6 1507 aa14.9□□□□□ -0.02
PNPT1-205ENST00000447944 ZNF316A6NFI3 1004 aaPredicted RBP14.89□□□□□ -0.03
PNPT1-205ENST00000447944 ITGAEP38570 1179 aa14.87□□□□□ -0.03
PNPT1-205ENST00000447944 ATP1B4Q9UN42 357 aaPredicted RBP14.83□□□□□ -0.04
PNPT1-205ENST00000447944 MIER1Q8N108 512 aa14.65□□□□□ -0.06
PNPT1-205ENST00000447944 CNGB1Q14028 1251 aaPredicted RBP14.63□□□□□ -0.07
PNPT1-205ENST00000447944 FKBP8Q14318 412 aa14.54□□□□□ -0.08
PNPT1-205ENST00000447944 RTL5Q5HYW3 569 aaPredicted RBP14.52□□□□□ -0.09
PNPT1-205ENST00000447944 POLR3GLQ9BT43 218 aa14.5□□□□□ -0.09
PNPT1-205ENST00000447944 CDK11AQ9UQ88 783 aaPredicted RBP14.48□□□□□ -0.09
PNPT1-205ENST00000447944 CCDC180Q9P1Z9 1646 aa14.46□□□□□ -0.09
PNPT1-205ENST00000447944 ANP32EQ9BTT0 268 aa14.42□□□□□ -0.1
PNPT1-205ENST00000447944 ANP32CO43423 234 aa14.41□□□□□ -0.1
PNPT1-205ENST00000447944 DAXXQ9UER7 740 aaPredicted RBP14.4□□□□□ -0.1
PNPT1-205ENST00000447944 CLSPNQ9HAW4 1339 aa14.38□□□□□ -0.11
PNPT1-205ENST00000447944 FAM50AQ14320 339 aaKnown RBP14.37□□□□□ -0.11
PNPT1-205ENST00000447944 CSRNP3Q8WYN3 585 aa14.36□□□□□ -0.11
PNPT1-205ENST00000447944 ZCCHC6Q5VYS8 1495 aaKnown RBP14.35□□□□□ -0.11
PNPT1-205ENST00000447944 TRIM52Q96A61 297 aa14.35□□□□□ -0.11
PNPT1-205ENST00000447944 DDX10Q13206 875 aaKnown RBP14.34□□□□□ -0.11
PNPT1-205ENST00000447944 BCL11AQ9H165 835 aa14.34□□□□□ -0.11
PNPT1-205ENST00000447944 SUPT16HQ9Y5B9 1047 aaKnown RBP14.3□□□□□ -0.12
PNPT1-205ENST00000447944 IRX6P78412 446 aaPredicted RBP14.26□□□□□ -0.13
PNPT1-205ENST00000447944 NBR1Q14596 966 aa14.26□□□□□ -0.13
PNPT1-205ENST00000447944 HNRNPUQ00839 825 aaKnown RBP eCLIP14.22□□□□□ -0.13
PNPT1-205ENST00000447944 HIRIP3Q9BW71 556 aaPredicted RBP14.21□□□□□ -0.13
PNPT1-205ENST00000447944 NPM2Q86SE8 214 aaKnown RBP14.19□□□□□ -0.14
PNPT1-205ENST00000447944 EIF5BO60841 1220 aaKnown RBP14.18□□□□□ -0.14
PNPT1-205ENST00000447944 ANP32AP39687 249 aaKnown RBP14.17□□□□□ -0.14
PNPT1-205ENST00000447944 TSHZ2Q9NRE2 1034 aa14.13□□□□□ -0.15
PNPT1-205ENST00000447944 FAM9BQ8IZU0 186 aa14.09□□□□□ -0.15
PNPT1-205ENST00000447944 CEP162Q5TB80 1403 aa14.07□□□□□ -0.16
PNPT1-205ENST00000447944 ZNF326Q5BKZ1 582 aaKnown RBP14.06□□□□□ -0.16
PNPT1-205ENST00000447944 RBM19Q9Y4C8 960 aaKnown RBP14.06□□□□□ -0.16
PNPT1-205ENST00000447944 MYT1LQ9UL68 1186 aa14.05□□□□□ -0.16
PNPT1-205ENST00000447944 P3H3Q8IVL6 736 aa14.05□□□□□ -0.16
PNPT1-205ENST00000447944 RSF1Q96T23 1441 aaPredicted RBP14.03□□□□□ -0.16
PNPT1-205ENST00000447944 PABPN1Q86U42 306 aaKnown RBP eCLIP14.03□□□□□ -0.16
PNPT1-205ENST00000447944 ZBTB47Q9UFB7 747 aaPredicted RBP14.02□□□□□ -0.16
PNPT1-205ENST00000447944 CCDC136Q96JN2 1154 aa13.99□□□□□ -0.17
PNPT1-205ENST00000447944 SCRIBQ14160 1630 aa13.99□□□□□ -0.17
PNPT1-205ENST00000447944 RTN4Q9NQC3 1192 aaKnown RBP13.98□□□□□ -0.17
PNPT1-205ENST00000447944 TONSLQ96HA7 1378 aa13.97□□□□□ -0.17
PNPT1-205ENST00000447944 ABCC9O60706 1549 aa13.96□□□□□ -0.17
PNPT1-205ENST00000447944 SENP3-EIF4A1A0A087X0R7 540 aa13.95□□□□□ -0.18
PNPT1-205ENST00000447944 CLIP1P30622 1438 aa13.94□□□□□ -0.18
PNPT1-205ENST00000447944 SALL2Q9Y467 1007 aaPredicted RBP13.94□□□□□ -0.18
PNPT1-205ENST00000447944 MRS2Q9HD23 443 aa13.92□□□□□ -0.18
PNPT1-205ENST00000447944 DEKP35659 375 aaKnown RBP13.91□□□□□ -0.18
PNPT1-205ENST00000447944 KCNH8Q96L42 1107 aa13.89□□□□□ -0.19
PNPT1-205ENST00000447944 SIN3AQ96ST3 1273 aa13.88□□□□□ -0.19
PNPT1-205ENST00000447944 TNIKQ9UKE5 1360 aa13.87□□□□□ -0.19
PNPT1-205ENST00000447944 B4GALNT3Q6L9W6 998 aa13.87□□□□□ -0.19
PNPT1-205ENST00000447944 ARID3CA6NKF2 412 aa13.83□□□□□ -0.19
PNPT1-205ENST00000447944 ARXQ96QS3 562 aa13.83□□□□□ -0.19
PNPT1-205ENST00000447944 NOP58Q9Y2X3 529 aaKnown RBP13.83□□□□□ -0.2
PNPT1-205ENST00000447944 LAS1LQ9Y4W2 734 aaKnown RBP13.81□□□□□ -0.2
PNPT1-205ENST00000447944 PPP4R2Q9NY27 417 aa13.8□□□□□ -0.2
PNPT1-205ENST00000447944 GOLGA3Q08378 1498 aa13.79□□□□□ -0.2
PNPT1-205ENST00000447944 SLC4A1APQ9BWU0 796 aaKnown RBP13.79□□□□□ -0.2
PNPT1-205ENST00000447944 CHIC2Q9UKJ5 165 aa13.78□□□□□ -0.2
PNPT1-205ENST00000447944 TMC1Q8TDI8 760 aa13.77□□□□□ -0.21
PNPT1-205ENST00000447944 SOGA1O94964 1423 aa13.77□□□□□ -0.21
PNPT1-205ENST00000447944 NEFMP07197 916 aa13.74□□□□□ -0.21
PNPT1-205ENST00000447944 RB1CC1Q8TDY2 1594 aa13.73□□□□□ -0.21
PNPT1-205ENST00000447944 EIF4G2P78344 907 aaKnown RBP eCLIP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms