RNA–Protein interactions for RNA: ENST00000399949.6

SPATA13-204, Transcript of spermatogenesis associated 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPATA13, Length 3,026 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA13-204ENST00000399949 NISCHQ9Y2I1 1504 aa18.22■□□□□ 0.51
SPATA13-204ENST00000399949 PELP1Q8IZL8 1130 aaKnown RBP16.28■□□□□ 0.2
SPATA13-204ENST00000399949 HRCP23327 699 aa16.19■□□□□ 0.18
SPATA13-204ENST00000399949 SHROOM4Q9ULL8 1493 aa16.15■□□□□ 0.18
SPATA13-204ENST00000399949 PPARGC1BQ86YN6 1023 aaKnown RBP16.09■□□□□ 0.17
SPATA13-204ENST00000399949 DCAF8L2P0C7V8 631 aa15.91■□□□□ 0.14
SPATA13-204ENST00000399949 SUPT5HO00267 1087 aaKnown RBP15.8■□□□□ 0.12
SPATA13-204ENST00000399949 PCGF6Q9BYE7 350 aa15.79■□□□□ 0.12
SPATA13-204ENST00000399949 MYT1Q01538 1121 aa15.73■□□□□ 0.11
SPATA13-204ENST00000399949 SCAF1Q9H7N4 1312 aaKnown RBP15.72■□□□□ 0.11
SPATA13-204ENST00000399949 ZCCHC6Q5VYS8 1495 aaKnown RBP15.34■□□□□ 0.05
SPATA13-204ENST00000399949 ABCC9O60706 1549 aa15.26■□□□□ 0.03
SPATA13-204ENST00000399949 MYO15BQ96JP2 1530 aa15.24■□□□□ 0.03
SPATA13-204ENST00000399949 CCDC180Q9P1Z9 1646 aa15.23■□□□□ 0.03
SPATA13-204ENST00000399949 NEUROD1Q13562 356 aa15.12■□□□□ 0.01
SPATA13-204ENST00000399949 GTF3C3Q9Y5Q9 886 aa15.11■□□□□ 0.01
SPATA13-204ENST00000399949 ACIN1Q9UKV3 1341 aaKnown RBP15.09■□□□□ 0.01
SPATA13-204ENST00000399949 CHIC1Q5VXU3 224 aa15.03■□□□□ -0
SPATA13-204ENST00000399949 BCL11AQ9H165 835 aa14.96□□□□□ -0.01
SPATA13-204ENST00000399949 TRIM26Q12899 539 aaPredicted RBP14.92□□□□□ -0.02
SPATA13-204ENST00000399949 ZEB1P37275 1124 aaPredicted RBP14.88□□□□□ -0.03
SPATA13-204ENST00000399949 FAM9AQ8IZU1 332 aaPredicted RBP14.86□□□□□ -0.03
SPATA13-204ENST00000399949 LOC105371045A0A1W2PR82 267 aa14.86□□□□□ -0.03
SPATA13-204ENST00000399949 EHMT2Q96KQ7 1210 aa14.85□□□□□ -0.03
SPATA13-204ENST00000399949 TTBK1Q5TCY1 1321 aaPredicted RBP14.84□□□□□ -0.03
SPATA13-204ENST00000399949 CENPBP07199 599 aaPredicted RBP14.82□□□□□ -0.04
SPATA13-204ENST00000399949 DCAF1Q9Y4B6 1507 aa14.79□□□□□ -0.04
SPATA13-204ENST00000399949 PRKCSHP14314 528 aaPredicted RBP14.77□□□□□ -0.04
SPATA13-204ENST00000399949 SCRIBQ14160 1630 aa14.76□□□□□ -0.05
SPATA13-204ENST00000399949 YTHDC1Q96MU7 727 aaKnown RBP14.66□□□□□ -0.06
SPATA13-204ENST00000399949 DIEXFQ68CQ4 756 aaKnown RBP14.6□□□□□ -0.07
SPATA13-204ENST00000399949 TRIM41Q8WV44 630 aa14.53□□□□□ -0.08
SPATA13-204ENST00000399949 ANP32EQ9BTT0 268 aa14.52□□□□□ -0.08
SPATA13-204ENST00000399949 RSF1Q96T23 1441 aaPredicted RBP14.51□□□□□ -0.09
SPATA13-204ENST00000399949 CSRNP3Q8WYN3 585 aa14.5□□□□□ -0.09
SPATA13-204ENST00000399949 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.45□□□□□ -0.1
SPATA13-204ENST00000399949 CECR2Q9BXF3 1484 aa14.44□□□□□ -0.1
SPATA13-204ENST00000399949 RB1CC1Q8TDY2 1594 aa14.42□□□□□ -0.1
SPATA13-204ENST00000399949 CCER1Q8TC90 406 aaPredicted RBP14.39□□□□□ -0.11
SPATA13-204ENST00000399949 PABPN1Q86U42 306 aaKnown RBP eCLIP14.36□□□□□ -0.11
SPATA13-204ENST00000399949 NACADO15069 1562 aa14.35□□□□□ -0.11
SPATA13-204ENST00000399949 MROH2BQ7Z745 1585 aa14.3□□□□□ -0.12
SPATA13-204ENST00000399949 TSHZ2Q9NRE2 1034 aa14.26□□□□□ -0.13
SPATA13-204ENST00000399949 ERICH6Q7L0X2 663 aa14.23□□□□□ -0.13
SPATA13-204ENST00000399949 WIZO95785 1651 aa14.21□□□□□ -0.13
SPATA13-204ENST00000399949 MIER1Q8N108 512 aa14.2□□□□□ -0.14
SPATA13-204ENST00000399949 SUPT16HQ9Y5B9 1047 aaKnown RBP14.17□□□□□ -0.14
SPATA13-204ENST00000399949 DNAJC5BQ9UF47 199 aa14.16□□□□□ -0.14
SPATA13-204ENST00000399949 ZNF316A6NFI3 1004 aaPredicted RBP14.11□□□□□ -0.15
SPATA13-204ENST00000399949 UNC13AQ9UPW8 1703 aa14.1□□□□□ -0.15
SPATA13-204ENST00000399949 APLP2Q06481 763 aa14.06□□□□□ -0.16
SPATA13-204ENST00000399949 ANO8Q9HCE9 1232 aaPredicted RBP14.06□□□□□ -0.16
SPATA13-204ENST00000399949 BCANQ96GW7 911 aa14.04□□□□□ -0.16
SPATA13-204ENST00000399949 BICRAQ9NZM4 1560 aa14.03□□□□□ -0.16
SPATA13-204ENST00000399949 RANGAP1P46060 587 aaPredicted RBP14.03□□□□□ -0.16
SPATA13-204ENST00000399949 ABCC8Q09428 1581 aa14.01□□□□□ -0.17
SPATA13-204ENST00000399949 BAZ1AQ9NRL2 1556 aaPredicted RBP13.96□□□□□ -0.17
SPATA13-204ENST00000399949 UBTFP17480 764 aaKnown RBP13.95□□□□□ -0.18
SPATA13-204ENST00000399949 CCDC88BA6NC98 1476 aa13.93□□□□□ -0.18
SPATA13-204ENST00000399949 SOGA1O94964 1423 aa13.88□□□□□ -0.19
SPATA13-204ENST00000399949 CCDC136Q96JN2 1154 aa13.88□□□□□ -0.19
SPATA13-204ENST00000399949 RBM19Q9Y4C8 960 aaKnown RBP13.88□□□□□ -0.19
SPATA13-204ENST00000399949 SMARCA4P51532 1647 aa13.87□□□□□ -0.19
SPATA13-204ENST00000399949 RUSC2Q8N2Y8 1516 aa13.83□□□□□ -0.19
SPATA13-204ENST00000399949 MSH5O43196 834 aa13.83□□□□□ -0.2
SPATA13-204ENST00000399949 SALL2Q9Y467 1007 aaPredicted RBP13.83□□□□□ -0.2
SPATA13-204ENST00000399949 TOP2AP11388 1531 aaKnown RBP13.82□□□□□ -0.2
SPATA13-204ENST00000399949 CLSPNQ9HAW4 1339 aa13.82□□□□□ -0.2
SPATA13-204ENST00000399949 SMARCA2P51531 1590 aa13.8□□□□□ -0.2
SPATA13-204ENST00000399949 ITGAEP38570 1179 aa13.78□□□□□ -0.2
SPATA13-204ENST00000399949 FKBP8Q14318 412 aa13.77□□□□□ -0.21
SPATA13-204ENST00000399949 DEKP35659 375 aaKnown RBP13.76□□□□□ -0.21
SPATA13-204ENST00000399949 EIF4G1Q04637 1599 aaKnown RBP13.72□□□□□ -0.21
SPATA13-204ENST00000399949 CEP162Q5TB80 1403 aa13.72□□□□□ -0.21
SPATA13-204ENST00000399949 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.72□□□□□ -0.21
SPATA13-204ENST00000399949 HNRNPUL2Q1KMD3 747 aaKnown RBP13.69□□□□□ -0.22
SPATA13-204ENST00000399949 CC2D2AQ9P2K1 1620 aa13.67□□□□□ -0.22
SPATA13-204ENST00000399949 WRNQ14191 1432 aaPredicted RBP eCLIP13.67□□□□□ -0.22
SPATA13-204ENST00000399949 RTN4Q9NQC3 1192 aaKnown RBP13.66□□□□□ -0.22
SPATA13-204ENST00000399949 BAZ1BQ9UIG0 1483 aaKnown RBP13.63□□□□□ -0.23
SPATA13-204ENST00000399949 KCNH8Q96L42 1107 aa13.63□□□□□ -0.23
SPATA13-204ENST00000399949 ATAD2BQ9ULI0 1458 aa13.61□□□□□ -0.23
SPATA13-204ENST00000399949 NBR1Q14596 966 aa13.6□□□□□ -0.23
SPATA13-204ENST00000399949 UBE2Q2Q8WVN8 375 aa13.58□□□□□ -0.24
SPATA13-204ENST00000399949 NEFLP07196 543 aa13.57□□□□□ -0.24
SPATA13-204ENST00000399949 TNIKQ9UKE5 1360 aa13.57□□□□□ -0.24
SPATA13-204ENST00000399949 SYNJ1O43426 1573 aa13.56□□□□□ -0.24
SPATA13-204ENST00000399949 IL27Q8NEV9 243 aa13.55□□□□□ -0.24
SPATA13-204ENST00000399949 GOLGA3Q08378 1498 aa13.52□□□□□ -0.24
SPATA13-204ENST00000399949 RAPGEF2Q9Y4G8 1499 aa13.49□□□□□ -0.25
SPATA13-204ENST00000399949 CLIP1P30622 1438 aa13.49□□□□□ -0.25
SPATA13-204ENST00000399949 MYT1LQ9UL68 1186 aa13.48□□□□□ -0.25
SPATA13-204ENST00000399949 FANCIQ9NVI1 1328 aa13.48□□□□□ -0.25
SPATA13-204ENST00000399949 EIF5BO60841 1220 aaKnown RBP13.46□□□□□ -0.25
SPATA13-204ENST00000399949 EEA1Q15075 1411 aa13.45□□□□□ -0.26
SPATA13-204ENST00000399949 ERICH6BQ5W0A0 696 aa13.44□□□□□ -0.26
SPATA13-204ENST00000399949 IRX6P78412 446 aaPredicted RBP13.43□□□□□ -0.26
SPATA13-204ENST00000399949 TRIM52Q96A61 297 aa13.43□□□□□ -0.26
SPATA13-204ENST00000399949 CEP164Q9UPV0 1460 aa13.43□□□□□ -0.26
SPATA13-204ENST00000399949 CDK11AQ9UQ88 783 aaPredicted RBP13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms