Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC14.91□□□□□ -0.02
RFC1P35251 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
RFC1P35251 UROS-203ENST00000368786 1216 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.91□□□□□ -0.02
RFC1P35251 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC14.91□□□□□ -0.02
RFC1P35251 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.91□□□□□ -0.02
RFC1P35251 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC14.91□□□□□ -0.02
RFC1P35251 AC006033.1-201ENST00000440505 426 ntBASIC14.91□□□□□ -0.02
RFC1P35251 EIF4HP1-201ENST00000453115 687 ntBASIC14.91□□□□□ -0.02
RFC1P35251 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC14.91□□□□□ -0.02
RFC1P35251 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.91□□□□□ -0.02
RFC1P35251 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.91□□□□□ -0.02
RFC1P35251 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC14.91□□□□□ -0.02
RFC1P35251 MIR3188-201ENST00000583494 85 ntBASIC14.91□□□□□ -0.02
RFC1P35251 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.91□□□□□ -0.02
RFC1P35251 AL022334.2-201ENST00000610000 484 ntBASIC14.91□□□□□ -0.02
RFC1P35251 MIR6869-201ENST00000619434 62 ntBASIC14.91□□□□□ -0.02
RFC1P35251 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
RFC1P35251 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 WDSUB1-201ENST00000358147 1535 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
RFC1P35251 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RFC1P35251 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC14.91□□□□□ -0.02
RFC1P35251 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC14.91□□□□□ -0.02
RFC1P35251 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.9□□□□□ -0.02
RFC1P35251 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 CKMT2-203ENST00000437669 1479 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RFC1P35251 AC061965.1-201ENST00000560524 1465 ntBASIC14.9□□□□□ -0.02
RFC1P35251 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RFC1P35251 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 AGO3-201ENST00000246314 3211 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RFC1P35251 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RFC1P35251 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RFC1P35251 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.9□□□□□ -0.02
RFC1P35251 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.9□□□□□ -0.02
RFC1P35251 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 RPS9P1-201ENST00000419943 583 ntBASIC14.9□□□□□ -0.02
RFC1P35251 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC14.9□□□□□ -0.02
RFC1P35251 OARD1-204ENST00000464633 717 ntTSL 2 BASIC14.9□□□□□ -0.02
RFC1P35251 RHEB-207ENST00000496004 744 ntTSL 2 BASIC14.9□□□□□ -0.02
RFC1P35251 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.9□□□□□ -0.02
RFC1P35251 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC14.9□□□□□ -0.02
RFC1P35251 AL645939.5-201ENST00000606834 243 ntBASIC14.9□□□□□ -0.02
RFC1P35251 AC026740.1-201ENST00000607068 791 ntBASIC14.9□□□□□ -0.02
RFC1P35251 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RFC1P35251 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.9□□□□□ -0.02
RFC1P35251 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC14.9□□□□□ -0.02
RFC1P35251 UBFD1-207ENST00000567212 4727 ntAPPRIS ALT2 TSL 2 BASIC14.9□□□□□ -0.02
RFC1P35251 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.9□□□□□ -0.02
RFC1P35251 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 AMT-256ENST00000638063 1783 ntTSL 5 BASIC14.9□□□□□ -0.02
RFC1P35251 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC14.9□□□□□ -0.02
RFC1P35251 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RFC1P35251 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RFC1P35251 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC14.9□□□□□ -0.02
RFC1P35251 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.9□□□□□ -0.02
RFC1P35251 BICDL2-204ENST00000573514 3519 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC1P35251 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC14.89□□□□□ -0.03
RFC1P35251 PPP6R2-203ENST00000395741 3304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 ATP12A-201ENST00000218548 3732 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC14.89□□□□□ -0.03
RFC1P35251 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.89□□□□□ -0.03
RFC1P35251 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC14.89□□□□□ -0.03
RFC1P35251 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
RFC1P35251 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
RFC1P35251 RNA5SP359-201ENST00000364838 113 ntBASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms