Protein–RNA interactions for Protein: P18615

NELFE, Negative elongation factor E, humanhuman

Known RBP Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NELFEP18615 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
NELFEP18615 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.07□□□□□ -0.16
NELFEP18615 SNHG17-201ENST00000413755 648 ntTSL 3 BASIC14.07□□□□□ -0.16
NELFEP18615 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC14.07□□□□□ -0.16
NELFEP18615 RCC2P8-201ENST00000502779 1035 ntBASIC14.07□□□□□ -0.16
NELFEP18615 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC14.07□□□□□ -0.16
NELFEP18615 RNA5SP423-201ENST00000517127 109 ntBASIC14.07□□□□□ -0.16
NELFEP18615 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC14.07□□□□□ -0.16
NELFEP18615 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 AC105129.2-201ENST00000559536 390 ntBASIC14.07□□□□□ -0.16
NELFEP18615 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC14.07□□□□□ -0.16
NELFEP18615 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC14.07□□□□□ -0.16
NELFEP18615 PAM16-211ENST00000575848 518 ntTSL 3 BASIC14.07□□□□□ -0.16
NELFEP18615 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
NELFEP18615 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC14.07□□□□□ -0.16
NELFEP18615 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 NAP1L6-202ENST00000641404 1222 ntBASIC14.07□□□□□ -0.16
NELFEP18615 FXYD5-201ENST00000342879 1580 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC14.07□□□□□ -0.16
NELFEP18615 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 PCDHB18P-202ENST00000526308 3197 ntBASIC14.07□□□□□ -0.16
NELFEP18615 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC14.07□□□□□ -0.16
NELFEP18615 MAGED4B-201ENST00000335504 2578 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 LRP8-203ENST00000354412 2553 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
NELFEP18615 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC14.06□□□□□ -0.16
NELFEP18615 FOSB-212ENST00000592811 3089 ntTSL 2 BASIC14.06□□□□□ -0.16
NELFEP18615 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 USP31-203ENST00000567975 2142 ntTSL 2 BASIC14.06□□□□□ -0.16
NELFEP18615 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
NELFEP18615 FAM13B-201ENST00000033079 5465 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NELFEP18615 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NELFEP18615 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NELFEP18615 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
NELFEP18615 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC14.06□□□□□ -0.16
NELFEP18615 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC14.06□□□□□ -0.16
NELFEP18615 AC078875.1-201ENST00000431907 724 ntBASIC14.06□□□□□ -0.16
NELFEP18615 AC006335.1-201ENST00000445200 547 ntBASIC14.06□□□□□ -0.16
NELFEP18615 AC012618.1-201ENST00000461223 412 ntBASIC14.06□□□□□ -0.16
NELFEP18615 RN7SL720P-201ENST00000488178 304 ntBASIC14.06□□□□□ -0.16
NELFEP18615 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC14.06□□□□□ -0.16
NELFEP18615 CCNC-217ENST00000523985 958 ntTSL 2 BASIC14.06□□□□□ -0.16
NELFEP18615 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.06□□□□□ -0.16
NELFEP18615 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.06□□□□□ -0.16
NELFEP18615 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC14.06□□□□□ -0.16
NELFEP18615 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC14.06□□□□□ -0.16
NELFEP18615 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 AC144522.1-201ENST00000625111 1658 ntBASIC14.06□□□□□ -0.16
NELFEP18615 PABPC1-208ENST00000519004 2401 ntTSL 2 BASIC14.06□□□□□ -0.16
NELFEP18615 MAP7D2-201ENST00000379643 3918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 HNRNPUL1-204ENST00000392006 3555 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 TAGLN-207ENST00000532870 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC14.06□□□□□ -0.16
NELFEP18615 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
NELFEP18615 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NELFEP18615 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NELFEP18615 AC073548.1-201ENST00000624088 1882 ntBASIC14.06□□□□□ -0.16
NELFEP18615 RNF26-201ENST00000311413 2787 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NELFEP18615 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC14.05□□□□□ -0.16
NELFEP18615 AC105345.1-202ENST00000382488 3204 ntTSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 AP001999.1-201ENST00000513405 3684 ntTSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NELFEP18615 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 ADAMTSL2-201ENST00000354484 4068 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.05□□□□□ -0.16
NELFEP18615 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 PCDHGB7-201ENST00000398594 4765 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NELFEP18615 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms