Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 TCAM1P-207ENST00000485295 1537 ntBASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 CAPZB-201ENST00000264202 858 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 DUTP3-201ENST00000450025 415 ntBASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 RPS6KA2-AS1-201ENST00000455390 627 ntTSL 5 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 MBP-227ENST00000526111 581 ntTSL 4 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 AP002803.1-201ENST00000528836 498 ntBASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 TSHR-205ENST00000554263 1184 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 FOS-204ENST00000554617 796 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 NPM1P43-201ENST00000558669 786 ntBASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 AC135983.4-201ENST00000564116 1262 ntBASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 AL031713.1-201ENST00000564813 661 ntBASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 MIR4750-201ENST00000584564 56 ntBASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 SIGLEC18P-201ENST00000602271 909 ntBASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 AC242376.2-201ENST00000619355 883 ntBASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 CLCN1-201ENST00000343257 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 MEOX2-201ENST00000262041 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 RBM4B-206ENST00000531036 1646 ntTSL 2 BASIC13.1□□□□□ -0.31
NPIPA1Q9UND3 MAN1B1-202ENST00000371589 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 VSIG10L-201ENST00000335624 3397 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 ODF2L-204ENST00000370566 2155 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 SAPCD1-208ENST00000415669 916 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 RPL7P35-201ENST00000446943 740 ntBASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 SAXO2-207ENST00000566861 404 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 MIR4522-201ENST00000584932 87 ntBASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 AC138894.2-201ENST00000602838 371 ntBASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 AC005632.3-201ENST00000605544 308 ntBASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 ZSCAN32-215ENST00000618425 2788 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.09□□□□□ -0.31
NPIPA1Q9UND3 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms