Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 MAX-218ENST00000557746 571 ntTSL 4 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 CSH2-206ENST00000560142 749 ntTSL 5 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 AC013355.1-201ENST00000562625 723 ntBASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 NEAT1-201ENST00000499732 1811 ntTSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 MEG3-213ENST00000455531 4867 ntTSL 2 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 NSD2-204ENST00000382891 7534 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
TTC9CQ8N5M4 SEC14L5-201ENST00000251170 6459 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 GSE1-201ENST00000253458 7495 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 GIT2-201ENST00000320063 2094 ntTSL 5 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 SMTN-201ENST00000333137 3295 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 SLC13A5-202ENST00000381074 1738 ntTSL 2 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 TSPY25P-201ENST00000429463 745 ntBASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 AC018735.1-201ENST00000437208 1502 ntBASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 AC027612.1-201ENST00000445234 2395 ntBASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 LINC00115-201ENST00000473798 1317 ntBASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 MIR3188-201ENST00000583494 85 ntBASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 AC130686.1-201ENST00000622936 2466 ntBASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 ABBA01031663.1-201ENST00000635630 790 ntBASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 LINC01815-202ENST00000641468 1409 ntBASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 AL928654.5-201ENST00000624831 2501 ntBASIC11.22□□□□□ -0.61
TTC9CQ8N5M4 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 TCAF1P1-201ENST00000414990 2232 ntBASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
TTC9CQ8N5M4 ZNF674-AS1-201ENST00000421685 2078 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms