Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 Metazoa_SRP.147-201ENST00000576563 312 ntBASIC13.43□□□□□ -0.26
RIF1Q5UIP0 Metazoa_SRP.168-201ENST00000621608 264 ntBASIC13.43□□□□□ -0.26
RIF1Q5UIP0 LINC00963-217ENST00000624009 663 ntTSL 5 BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 PTN-202ENST00000393083 1599 ntTSL 5 BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 DLX4-206ENST00000611342 1662 ntBASIC13.43□□□□□ -0.26
RIF1Q5UIP0 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 PES1P2-201ENST00000449745 1735 ntBASIC13.43□□□□□ -0.26
RIF1Q5UIP0 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.43□□□□□ -0.26
RIF1Q5UIP0 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AC012066.1-201ENST00000439252 694 ntBASIC13.42□□□□□ -0.26
RIF1Q5UIP0 MYCBP-203ENST00000494695 750 ntTSL 2 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AP002852.2-202ENST00000523572 592 ntTSL 4 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AC006273.1-201ENST00000606966 861 ntBASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AC005519.2-201ENST00000554532 1367 ntTSL 4 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AD000864.1-201ENST00000624076 2295 ntBASIC13.42□□□□□ -0.26
RIF1Q5UIP0 SCYL1-206ENST00000525364 2584 ntTSL 5 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 PCDHA1-201ENST00000378133 2726 ntBASIC13.42□□□□□ -0.26
RIF1Q5UIP0 ZFP1-201ENST00000332307 1502 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 DMC1-207ENST00000616615 1595 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 COQ10BP2-201ENST00000513804 724 ntBASIC13.42□□□□□ -0.26
RIF1Q5UIP0 IGHV7-56-201ENST00000518372 351 ntBASIC13.42□□□□□ -0.26
RIF1Q5UIP0 PRSS55-203ENST00000522210 1005 ntTSL 2 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AL355075.5-201ENST00000553568 890 ntBASIC13.42□□□□□ -0.26
RIF1Q5UIP0 RN7SL162P-201ENST00000579233 292 ntBASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AL162731.1-201ENST00000613248 876 ntTSL 3 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 APOBEC3A-205ENST00000618553 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 GMPR2-205ENST00000456667 1484 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AC023024.2-201ENST00000623561 1993 ntBASIC13.42□□□□□ -0.26
RIF1Q5UIP0 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RIF1Q5UIP0 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 MRPS16P3-201ENST00000415961 374 ntBASIC13.41□□□□□ -0.26
RIF1Q5UIP0 PTPA-219ENST00000435305 530 ntTSL 2 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 PRDX3P2-201ENST00000447051 611 ntBASIC13.41□□□□□ -0.26
RIF1Q5UIP0 AC104115.1-201ENST00000484005 623 ntBASIC13.41□□□□□ -0.26
RIF1Q5UIP0 AC090589.3-201ENST00000524412 574 ntTSL 5 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 HAX1-211ENST00000532105 771 ntTSL 3 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 FP325317.1-201ENST00000539936 1042 ntBASIC13.41□□□□□ -0.26
RIF1Q5UIP0 HNRNPA1P11-201ENST00000580106 956 ntBASIC13.41□□□□□ -0.26
RIF1Q5UIP0 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 DHRS12-202ENST00000280056 1324 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RIF1Q5UIP0 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 64.1 ms