Protein–RNA interactions for Protein: P52799

EFNB2, Ephrin-B2, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB2P52799 MARK2-205ENST00000408948 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC12.28□□□□□ -0.44
EFNB2P52799 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
EFNB2P52799 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC12.28□□□□□ -0.44
EFNB2P52799 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 C19orf18-201ENST00000314391 915 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
EFNB2P52799 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 AC012441.1-201ENST00000446669 685 ntBASIC12.28□□□□□ -0.44
EFNB2P52799 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.28□□□□□ -0.44
EFNB2P52799 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC12.28□□□□□ -0.44
EFNB2P52799 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC12.28□□□□□ -0.44
EFNB2P52799 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
EFNB2P52799 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.28□□□□□ -0.44
EFNB2P52799 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC12.28□□□□□ -0.44
EFNB2P52799 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC12.28□□□□□ -0.44
EFNB2P52799 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 AC002472.3-201ENST00000640124 621 ntBASIC12.28□□□□□ -0.44
EFNB2P52799 RHPN1-AS1-201ENST00000518049 1918 ntBASIC12.28□□□□□ -0.44
EFNB2P52799 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC12.28□□□□□ -0.44
EFNB2P52799 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 SLC26A6-202ENST00000337000 2317 ntTSL 2 BASIC12.28□□□□□ -0.44
EFNB2P52799 TNRC18P1-201ENST00000502875 3650 ntBASIC12.28□□□□□ -0.44
EFNB2P52799 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC12.28□□□□□ -0.44
EFNB2P52799 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.28□□□□□ -0.44
EFNB2P52799 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC12.28□□□□□ -0.44
EFNB2P52799 CDCA3-202ENST00000422785 2760 ntTSL 2 BASIC12.28□□□□□ -0.44
EFNB2P52799 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 TMEM40-205ENST00000435575 1785 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
EFNB2P52799 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
EFNB2P52799 BCRP2-203ENST00000461808 1832 ntTSL 2 BASIC12.27□□□□□ -0.44
EFNB2P52799 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
EFNB2P52799 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.44
EFNB2P52799 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.44
EFNB2P52799 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
EFNB2P52799 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
EFNB2P52799 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.27□□□□□ -0.44
EFNB2P52799 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.27□□□□□ -0.44
EFNB2P52799 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
EFNB2P52799 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
EFNB2P52799 SALL4P6-201ENST00000429385 1691 ntBASIC12.27□□□□□ -0.45
EFNB2P52799 ZFAND3-201ENST00000287218 3366 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
EFNB2P52799 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
EFNB2P52799 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
EFNB2P52799 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC12.27□□□□□ -0.45
EFNB2P52799 GZMB-202ENST00000382540 816 ntTSL 5 BASIC12.27□□□□□ -0.45
EFNB2P52799 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
EFNB2P52799 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC12.27□□□□□ -0.45
EFNB2P52799 USB1-202ENST00000423271 1217 ntTSL 2 BASIC12.27□□□□□ -0.45
EFNB2P52799 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC12.27□□□□□ -0.45
EFNB2P52799 RPL7P3-201ENST00000441388 714 ntBASIC12.27□□□□□ -0.45
EFNB2P52799 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.27□□□□□ -0.45
EFNB2P52799 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC12.27□□□□□ -0.45
EFNB2P52799 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.27□□□□□ -0.45
EFNB2P52799 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC12.27□□□□□ -0.45
EFNB2P52799 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC12.27□□□□□ -0.45
EFNB2P52799 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC12.27□□□□□ -0.45
EFNB2P52799 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
EFNB2P52799 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.27□□□□□ -0.45
EFNB2P52799 AC027601.3-201ENST00000622907 509 ntBASIC12.27□□□□□ -0.45
EFNB2P52799 CR392039.2-201ENST00000623182 509 ntBASIC12.27□□□□□ -0.45
EFNB2P52799 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC12.27□□□□□ -0.45
EFNB2P52799 SYNE2-228ENST00000639659 1290 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
EFNB2P52799 DHTKD1-201ENST00000263035 5159 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
EFNB2P52799 MSNP1-201ENST00000511640 1732 ntBASIC12.27□□□□□ -0.45
EFNB2P52799 RBSN-207ENST00000476527 3005 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
EFNB2P52799 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC12.27□□□□□ -0.45
EFNB2P52799 RPGRIP1-202ENST00000400017 3940 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
EFNB2P52799 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
EFNB2P52799 SDR9C7-201ENST00000293502 1765 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
EFNB2P52799 RPA2-203ENST00000373912 1752 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
EFNB2P52799 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
EFNB2P52799 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC12.27□□□□□ -0.45
EFNB2P52799 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC12.27□□□□□ -0.45
EFNB2P52799 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC12.27□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms