Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 PLA2G2E-201ENST00000375116 785 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 WDR54-202ENST00000409791 854 ntTSL 3 BASIC14.19□□□□□ -0.14
LTBRP36941 AP001331.1-201ENST00000413008 1015 ntBASIC14.19□□□□□ -0.14
LTBRP36941 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC14.19□□□□□ -0.14
LTBRP36941 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC14.19□□□□□ -0.14
LTBRP36941 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC14.19□□□□□ -0.14
LTBRP36941 AC105443.1-201ENST00000433754 712 ntBASIC14.19□□□□□ -0.14
LTBRP36941 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC14.19□□□□□ -0.14
LTBRP36941 AP001107.9-202ENST00000531602 613 ntTSL 2 BASIC14.19□□□□□ -0.14
LTBRP36941 AL513165.2-203ENST00000537239 717 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LTBRP36941 RN7SL202P-201ENST00000584410 262 ntBASIC14.19□□□□□ -0.14
LTBRP36941 MIR5193-201ENST00000584510 109 ntBASIC14.19□□□□□ -0.14
LTBRP36941 ADORA3-204ENST00000632535 1201 ntTSL 3 BASIC14.19□□□□□ -0.14
LTBRP36941 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LTBRP36941 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LTBRP36941 AC040160.2-201ENST00000623816 1675 ntBASIC14.19□□□□□ -0.14
LTBRP36941 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.19□□□□□ -0.14
LTBRP36941 EEF1G-201ENST00000329251 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 AL591806.3-201ENST00000289779 2096 ntAPPRIS P5 TSL 2 BASIC14.19□□□□□ -0.14
LTBRP36941 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
LTBRP36941 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.19□□□□□ -0.14
LTBRP36941 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LTBRP36941 AC023509.3-202ENST00000591834 1609 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
LTBRP36941 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LTBRP36941 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
LTBRP36941 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
LTBRP36941 OR2V1-204ENST00000641551 2423 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
LTBRP36941 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.19□□□□□ -0.14
LTBRP36941 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.18□□□□□ -0.14
LTBRP36941 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBRP36941 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LTBRP36941 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
LTBRP36941 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 HLA-DQA1-201ENST00000343139 1591 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LTBRP36941 ATP1B3-201ENST00000286371 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 ANXA9-201ENST00000368947 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.18□□□□□ -0.14
LTBRP36941 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC14.18□□□□□ -0.14
LTBRP36941 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
LTBRP36941 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 VKORC1-203ENST00000354895 901 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 MUC1-207ENST00000368392 1032 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 MUC1-208ENST00000368393 937 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 CD3G-202ENST00000392883 1179 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBRP36941 THAP4-203ENST00000402545 833 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBRP36941 TEX33-203ENST00000405091 1149 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
LTBRP36941 ASLP1-201ENST00000428790 637 ntBASIC14.18□□□□□ -0.14
LTBRP36941 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC14.18□□□□□ -0.14
LTBRP36941 DUX4L31-201ENST00000446466 1136 ntBASIC14.18□□□□□ -0.14
LTBRP36941 AC005077.3-201ENST00000449614 213 ntBASIC14.18□□□□□ -0.14
LTBRP36941 MUC1-213ENST00000462215 1189 ntTSL 2 BASIC14.18□□□□□ -0.14
LTBRP36941 RN7SL33P-201ENST00000462543 342 ntBASIC14.18□□□□□ -0.14
LTBRP36941 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBRP36941 AC027228.1-201ENST00000560094 325 ntTSL 3 BASIC14.18□□□□□ -0.14
LTBRP36941 RN7SL162P-201ENST00000579233 292 ntBASIC14.18□□□□□ -0.14
LTBRP36941 AC009812.1-201ENST00000605948 1059 ntBASIC14.18□□□□□ -0.14
LTBRP36941 AC021321.1-201ENST00000607397 1113 ntBASIC14.18□□□□□ -0.14
LTBRP36941 AL109954.3-201ENST00000615088 558 ntBASIC14.18□□□□□ -0.14
LTBRP36941 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBRP36941 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBRP36941 INHBA-205ENST00000638023 2002 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LTBRP36941 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
LTBRP36941 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC14.18□□□□□ -0.14
LTBRP36941 LINC00682-202ENST00000499082 1384 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LTBRP36941 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC14.18□□□□□ -0.14
LTBRP36941 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 CTRL-205ENST00000574481 1721 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
LTBRP36941 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 PTBP1-204ENST00000394601 3185 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
LTBRP36941 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
LTBRP36941 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC14.17□□□□□ -0.14
LTBRP36941 LARP4-207ENST00000518561 1578 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
LTBRP36941 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms