Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 ASXL1-201ENST00000306058 6591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.28□□□□□ -0.12
HLA-DPA1P20036 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 FCRLB-202ENST00000367944 1172 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 AL596276.2-201ENST00000447525 331 ntBASIC14.28□□□□□ -0.12
HLA-DPA1P20036 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 AC068760.1-201ENST00000493579 1953 ntBASIC14.28□□□□□ -0.12
HLA-DPA1P20036 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 SDHD-202ENST00000525291 790 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 CMC2-204ENST00000562713 573 ntTSL 3 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 CMC2-209ENST00000565108 399 ntTSL 2 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 AC091544.8-201ENST00000619490 361 ntBASIC14.28□□□□□ -0.12
HLA-DPA1P20036 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 SUSD6-201ENST00000342745 5388 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
HLA-DPA1P20036 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 AC015909.5-201ENST00000624336 2266 ntBASIC14.27□□□□□ -0.12
HLA-DPA1P20036 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.27□□□□□ -0.12
HLA-DPA1P20036 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 NPR1-202ENST00000368680 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
HLA-DPA1P20036 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 AC006987.1-201ENST00000413610 527 ntBASIC14.27□□□□□ -0.13
HLA-DPA1P20036 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 AKR7A2P1-201ENST00000460134 915 ntBASIC14.27□□□□□ -0.13
HLA-DPA1P20036 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 NDUFV2P1-201ENST00000596415 907 ntBASIC14.27□□□□□ -0.13
HLA-DPA1P20036 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 UGT3A2-201ENST00000282507 2355 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.27□□□□□ -0.13
HLA-DPA1P20036 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 MAN2B2-202ENST00000504248 2968 ntTSL 2 BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
HLA-DPA1P20036 PKM-220ENST00000568459 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms