Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 MAPK14-202ENST00000229795 4319 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 GIPC3-201ENST00000322315 4335 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC17.02■□□□□ 0.32
APPP05067 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
APPP05067 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC17.02■□□□□ 0.32
APPP05067 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.02■□□□□ 0.32
APPP05067 NAGK-204ENST00000443872 878 ntTSL 3 BASIC17.02■□□□□ 0.32
APPP05067 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.02■□□□□ 0.32
APPP05067 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 AL133499.1-201ENST00000596207 608 ntBASIC17.02■□□□□ 0.32
APPP05067 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
APPP05067 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
APPP05067 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APPP05067 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
APPP05067 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APPP05067 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APPP05067 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
APPP05067 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
APPP05067 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
APPP05067 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC17.02■□□□□ 0.31
APPP05067 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.31
APPP05067 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC17.02■□□□□ 0.31
APPP05067 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC17.01■□□□□ 0.31
APPP05067 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC17.01■□□□□ 0.31
APPP05067 SARS2-202ENST00000430193 1886 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
APPP05067 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC17.01■□□□□ 0.31
APPP05067 SYT12-201ENST00000393946 4534 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
APPP05067 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 CPSF1-212ENST00000616140 4494 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC17.01■□□□□ 0.31
APPP05067 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC17.01■□□□□ 0.31
APPP05067 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
APPP05067 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
APPP05067 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 AC103592.1-201ENST00000394513 664 ntBASIC17.01■□□□□ 0.31
APPP05067 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 HLA-DQB2-229ENST00000411527 1059 ntBASIC17.01■□□□□ 0.31
APPP05067 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 AC073869.2-201ENST00000417338 1026 ntBASIC17.01■□□□□ 0.31
APPP05067 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC17.01■□□□□ 0.31
APPP05067 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
APPP05067 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
APPP05067 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 AC105129.2-201ENST00000559536 390 ntBASIC17.01■□□□□ 0.31
APPP05067 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC17.01■□□□□ 0.31
APPP05067 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC17.01■□□□□ 0.31
APPP05067 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
APPP05067 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.01■□□□□ 0.31
APPP05067 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC17.01■□□□□ 0.31
APPP05067 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC17.01■□□□□ 0.31
APPP05067 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
APPP05067 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC17.01■□□□□ 0.31
APPP05067 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 OSER1-201ENST00000255174 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
APPP05067 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC17.01■□□□□ 0.31
APPP05067 POLR2B-205ENST00000441246 3839 ntTSL 2 BASIC17.01■□□□□ 0.31
APPP05067 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 AC090643.2-201ENST00000623442 2029 ntBASIC17.01■□□□□ 0.31
APPP05067 AC118758.2-201ENST00000614242 2813 ntBASIC17.01■□□□□ 0.31
APPP05067 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
APPP05067 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
APPP05067 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
APPP05067 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 AC104667.2-202ENST00000452801 1301 ntTSL 2 BASIC17■□□□□ 0.31
APPP05067 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
APPP05067 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC17■□□□□ 0.31
APPP05067 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 TMSB10-201ENST00000233143 496 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 LINC01662-201ENST00000342888 1859 ntTSL 2 BASIC17■□□□□ 0.31
APPP05067 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC17■□□□□ 0.31
APPP05067 SLC13A3-205ENST00000417157 876 ntTSL 1 (best) BASIC17■□□□□ 0.31
APPP05067 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC17■□□□□ 0.31
APPP05067 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
APPP05067 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC17■□□□□ 0.31
APPP05067 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC17■□□□□ 0.31
APPP05067 AP000358.1-201ENST00000456260 156 ntBASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 12.2 ms