Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 AC114947.1-202ENST00000514136 344 ntBASIC12.46□□□□□ -0.41
NPIPB4C9JG80 SCARNA20.5-201ENST00000516991 142 ntBASIC12.46□□□□□ -0.41
NPIPB4C9JG80 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 PHBP15-201ENST00000574228 665 ntBASIC12.46□□□□□ -0.41
NPIPB4C9JG80 RPL18A-204ENST00000599898 491 ntTSL 2 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 AL021707.6-201ENST00000609212 491 ntBASIC12.46□□□□□ -0.41
NPIPB4C9JG80 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 TRAPPC8-201ENST00000283351 6226 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC12.46□□□□□ -0.41
NPIPB4C9JG80 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 LINC00969-231ENST00000597482 1476 ntTSL 5 BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 AC138028.6-201ENST00000616106 1482 ntBASIC12.46□□□□□ -0.42
NPIPB4C9JG80 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
NPIPB4C9JG80 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 KRT8P31-201ENST00000504812 1408 ntBASIC12.45□□□□□ -0.42
NPIPB4C9JG80 GOLGA2P7-207ENST00000559668 4253 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 PRDM16-203ENST00000378391 5447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 UGGT2-201ENST00000376712 2240 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 TMUB2-202ENST00000357984 1921 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 LBHD1-201ENST00000354588 1320 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 NRADDP-202ENST00000641269 1585 ntBASIC12.45□□□□□ -0.42
NPIPB4C9JG80 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 ISCA2P1-201ENST00000425548 448 ntBASIC12.45□□□□□ -0.42
NPIPB4C9JG80 AC016825.1-201ENST00000433600 778 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 AC061961.1-201ENST00000443901 432 ntTSL 3 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 AC006335.1-201ENST00000445200 547 ntBASIC12.45□□□□□ -0.42
NPIPB4C9JG80 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 AC132825.4-202ENST00000578792 434 ntBASIC12.45□□□□□ -0.42
NPIPB4C9JG80 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 LINC01669-205ENST00000624561 713 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 GARS-210ENST00000627489 324 ntTSL 4 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 AC244452.3-201ENST00000636814 210 ntBASIC12.45□□□□□ -0.42
NPIPB4C9JG80 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 AC015909.3-201ENST00000572855 1794 ntBASIC12.45□□□□□ -0.42
NPIPB4C9JG80 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 AC114271.1-201ENST00000612689 2813 ntBASIC12.45□□□□□ -0.42
NPIPB4C9JG80 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
NPIPB4C9JG80 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
NPIPB4C9JG80 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms