Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 DDC-204ENST00000426377 1700 ntTSL 3 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 LINC00675-202ENST00000581851 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 SIGLEC17P-204ENST00000618545 1517 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.99■□□□□ 0.15
TMEM88BA6NKF7 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 LINC00554-201ENST00000564841 3011 ntBASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AC018442.1-201ENST00000421439 2061 ntBASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 LY6G6F-201ENST00000375832 920 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AL121994.1-201ENST00000413189 402 ntBASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AC234771.1-201ENST00000416873 250 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AC159540.1-201ENST00000422600 555 ntTSL 4 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AC008267.3-201ENST00000448776 712 ntBASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 PARVG-208ENST00000466375 820 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AL662899.2-201ENST00000503322 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AC253536.5-201ENST00000506097 347 ntBASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 HNRNPA1P4-201ENST00000509706 756 ntBASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 RPS23-205ENST00000510019 1019 ntTSL 4 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 LINC01922-201ENST00000562582 719 ntBASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 TTC39A-AS1-201ENST00000564479 812 ntTSL 3 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AC116914.2-201ENST00000571741 291 ntTSL 5 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 MIR4526-201ENST00000583168 87 ntBASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 NSRP1-213ENST00000584423 482 ntTSL 2 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AL356740.1-201ENST00000602192 1297 ntBASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AC241585.2-202ENST00000621798 1015 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 AL162727.3-201ENST00000635661 2787 ntBASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 MARS-233ENST00000628866 2583 ntTSL 5 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
TMEM88BA6NKF7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 SLIRP-201ENST00000238688 394 ntAPPRIS P3 TSL 2 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 AC008080.1-201ENST00000311067 1058 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 HMGN1P4-201ENST00000419500 290 ntBASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 AC022447.2-201ENST00000509750 543 ntTSL 3 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 AC090200.1-201ENST00000522918 590 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 FTH1-205ENST00000529631 507 ntTSL 4 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 AC009132.1-201ENST00000565194 320 ntBASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 MED11-203ENST00000575284 652 ntTSL 3 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 SNRPN-208ENST00000577565 1298 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 AC131274.3-201ENST00000578745 1271 ntBASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 SKINT1L-204ENST00000604015 540 ntTSL 4 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 SNORA50D-202ENST00000627561 132 ntBASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC15.97■□□□□ 0.15
TMEM88BA6NKF7 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 RECQL5-218ENST00000584999 1922 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 TBC1D3P1-201ENST00000590047 1693 ntBASIC15.96■□□□□ 0.15
TMEM88BA6NKF7 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms