Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR3Q9UNL2 GGH-201ENST00000260118 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
SSR3Q9UNL2 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR3Q9UNL2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.03■□□□□ 0.8
SSR3Q9UNL2 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR3Q9UNL2 MOB2-207ENST00000614710 705 ntTSL 5 BASIC20.03■□□□□ 0.8
SSR3Q9UNL2 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR3Q9UNL2 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
SSR3Q9UNL2 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SSR3Q9UNL2 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSR3Q9UNL2 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSR3Q9UNL2 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SSR3Q9UNL2 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SSR3Q9UNL2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SSR3Q9UNL2 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.01■□□□□ 0.79
SSR3Q9UNL2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR3Q9UNL2 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.01■□□□□ 0.79
SSR3Q9UNL2 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR3Q9UNL2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR3Q9UNL2 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR3Q9UNL2 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC20.01■□□□□ 0.79
SSR3Q9UNL2 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC20.01■□□□□ 0.79
SSR3Q9UNL2 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.01■□□□□ 0.79
SSR3Q9UNL2 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SSR3Q9UNL2 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR3Q9UNL2 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SSR3Q9UNL2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
SSR3Q9UNL2 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC20■□□□□ 0.79
SSR3Q9UNL2 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20■□□□□ 0.79
SSR3Q9UNL2 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20■□□□□ 0.79
SSR3Q9UNL2 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR3Q9UNL2 TRIM54-202ENST00000380075 1967 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR3Q9UNL2 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR3Q9UNL2 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC20■□□□□ 0.79
SSR3Q9UNL2 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR3Q9UNL2 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SSR3Q9UNL2 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20■□□□□ 0.79
SSR3Q9UNL2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR3Q9UNL2 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.99■□□□□ 0.79
SSR3Q9UNL2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR3Q9UNL2 C11orf96-202ENST00000528572 1834 ntBASIC19.99■□□□□ 0.79
SSR3Q9UNL2 AC092053.2-201ENST00000640557 1818 ntBASIC19.99■□□□□ 0.79
SSR3Q9UNL2 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR3Q9UNL2 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
SSR3Q9UNL2 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR3Q9UNL2 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR3Q9UNL2 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR3Q9UNL2 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC19.99■□□□□ 0.79
SSR3Q9UNL2 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SSR3Q9UNL2 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SSR3Q9UNL2 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SSR3Q9UNL2 REST-210ENST00000638187 1334 ntTSL 5 BASIC19.98■□□□□ 0.79
SSR3Q9UNL2 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR3Q9UNL2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR3Q9UNL2 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.97■□□□□ 0.79
SSR3Q9UNL2 RP9P-202ENST00000450133 1212 ntBASIC19.97■□□□□ 0.79
SSR3Q9UNL2 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
SSR3Q9UNL2 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SSR3Q9UNL2 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
SSR3Q9UNL2 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSR3Q9UNL2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
SSR3Q9UNL2 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
SSR3Q9UNL2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSR3Q9UNL2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
SSR3Q9UNL2 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR3Q9UNL2 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
SSR3Q9UNL2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR3Q9UNL2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC19.96■□□□□ 0.79
SSR3Q9UNL2 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC19.96■□□□□ 0.79
SSR3Q9UNL2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
SSR3Q9UNL2 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
SSR3Q9UNL2 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.96■□□□□ 0.79
SSR3Q9UNL2 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.96■□□□□ 0.79
SSR3Q9UNL2 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC19.96■□□□□ 0.79
SSR3Q9UNL2 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR3Q9UNL2 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSR3Q9UNL2 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
SSR3Q9UNL2 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR3Q9UNL2 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR3Q9UNL2 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR3Q9UNL2 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
SSR3Q9UNL2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms