Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
CDC42SE1Q9NRR8 AC010501.1-201ENST00000606270 1962 ntBASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC11.68□□□□□ -0.54
CDC42SE1Q9NRR8 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 TERT-206ENST00000508104 2486 ntTSL 5 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 HCG11-201ENST00000411553 5696 ntBASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.54
CDC42SE1Q9NRR8 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
CDC42SE1Q9NRR8 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE1Q9NRR8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE1Q9NRR8 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
CDC42SE1Q9NRR8 AC120498.9-201ENST00000339021 3867 ntBASIC11.65□□□□□ -0.54
CDC42SE1Q9NRR8 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC11.65□□□□□ -0.54
CDC42SE1Q9NRR8 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE1Q9NRR8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE1Q9NRR8 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
CDC42SE1Q9NRR8 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
CDC42SE1Q9NRR8 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC11.65□□□□□ -0.55
CDC42SE1Q9NRR8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC11.64□□□□□ -0.55
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms