Protein–RNA interactions for Protein: Q99788

CMKLR1, Chemokine-like receptor 1, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMKLR1Q99788 AICDA-202ENST00000537228 667 ntTSL 5 BASIC21.53■■□□□ 1.04
CMKLR1Q99788 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC21.53■■□□□ 1.04
CMKLR1Q99788 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
CMKLR1Q99788 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
CMKLR1Q99788 GTSE1-AS1-202ENST00000623117 1518 ntBASIC21.53■■□□□ 1.04
CMKLR1Q99788 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC21.53■■□□□ 1.04
CMKLR1Q99788 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC21.52■■□□□ 1.04
CMKLR1Q99788 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CMKLR1Q99788 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CMKLR1Q99788 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CMKLR1Q99788 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC21.52■■□□□ 1.04
CMKLR1Q99788 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC21.52■■□□□ 1.04
CMKLR1Q99788 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
CMKLR1Q99788 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC21.52■■□□□ 1.04
CMKLR1Q99788 PFKP-201ENST00000381072 1698 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
CMKLR1Q99788 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
CMKLR1Q99788 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
CMKLR1Q99788 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.03
CMKLR1Q99788 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
CMKLR1Q99788 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CMKLR1Q99788 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC21.51■■□□□ 1.03
CMKLR1Q99788 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC21.51■■□□□ 1.03
CMKLR1Q99788 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC21.51■■□□□ 1.03
CMKLR1Q99788 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC21.51■■□□□ 1.03
CMKLR1Q99788 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC21.51■■□□□ 1.03
CMKLR1Q99788 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
CMKLR1Q99788 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
CMKLR1Q99788 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC21.5■■□□□ 1.03
CMKLR1Q99788 NR2F1-AS1-210ENST00000606739 1431 ntTSL 2 BASIC21.5■■□□□ 1.03
CMKLR1Q99788 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CMKLR1Q99788 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.5■■□□□ 1.03
CMKLR1Q99788 AC034268.1-201ENST00000441047 882 ntBASIC21.5■■□□□ 1.03
CMKLR1Q99788 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.5■■□□□ 1.03
CMKLR1Q99788 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
CMKLR1Q99788 EI24-204ENST00000527235 1625 ntTSL 5 BASIC21.5■■□□□ 1.03
CMKLR1Q99788 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC21.5■■□□□ 1.03
CMKLR1Q99788 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC21.5■■□□□ 1.03
CMKLR1Q99788 TSPY26P-201ENST00000476365 1326 ntBASIC21.5■■□□□ 1.03
CMKLR1Q99788 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CMKLR1Q99788 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
CMKLR1Q99788 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC21.49■■□□□ 1.03
CMKLR1Q99788 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CMKLR1Q99788 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC21.49■■□□□ 1.03
CMKLR1Q99788 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC21.49■■□□□ 1.03
CMKLR1Q99788 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC21.49■■□□□ 1.03
CMKLR1Q99788 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC21.49■■□□□ 1.03
CMKLR1Q99788 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC21.49■■□□□ 1.03
CMKLR1Q99788 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
CMKLR1Q99788 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CMKLR1Q99788 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC21.49■■□□□ 1.03
CMKLR1Q99788 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.48■■□□□ 1.03
CMKLR1Q99788 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC21.48■■□□□ 1.03
CMKLR1Q99788 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC21.48■■□□□ 1.03
CMKLR1Q99788 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC21.48■■□□□ 1.03
CMKLR1Q99788 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CMKLR1Q99788 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CMKLR1Q99788 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CMKLR1Q99788 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CMKLR1Q99788 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CMKLR1Q99788 YBX1P1-201ENST00000445822 960 ntBASIC21.47■■□□□ 1.03
CMKLR1Q99788 SLC47A1P1-202ENST00000449666 945 ntBASIC21.47■■□□□ 1.03
CMKLR1Q99788 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.47■■□□□ 1.03
CMKLR1Q99788 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CMKLR1Q99788 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CMKLR1Q99788 LINC01342-201ENST00000416774 1620 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CMKLR1Q99788 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CMKLR1Q99788 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CMKLR1Q99788 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CMKLR1Q99788 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CMKLR1Q99788 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC21.46■■□□□ 1.03
CMKLR1Q99788 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CMKLR1Q99788 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC21.46■■□□□ 1.03
CMKLR1Q99788 AL358852.1-201ENST00000623174 1268 ntBASIC21.46■■□□□ 1.03
CMKLR1Q99788 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CMKLR1Q99788 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CMKLR1Q99788 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CMKLR1Q99788 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
CMKLR1Q99788 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.46■■□□□ 1.03
CMKLR1Q99788 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC21.45■■□□□ 1.03
CMKLR1Q99788 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CMKLR1Q99788 AP003733.4-201ENST00000623785 1697 ntBASIC21.45■■□□□ 1.02
CMKLR1Q99788 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
CMKLR1Q99788 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.45■■□□□ 1.02
CMKLR1Q99788 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC21.45■■□□□ 1.02
CMKLR1Q99788 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.45■■□□□ 1.02
CMKLR1Q99788 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CMKLR1Q99788 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.45■■□□□ 1.02
CMKLR1Q99788 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
CMKLR1Q99788 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC21.45■■□□□ 1.02
CMKLR1Q99788 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
CMKLR1Q99788 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CMKLR1Q99788 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CMKLR1Q99788 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.44■■□□□ 1.02
CMKLR1Q99788 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21.44■■□□□ 1.02
CMKLR1Q99788 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
CMKLR1Q99788 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
CMKLR1Q99788 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
CMKLR1Q99788 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.44■■□□□ 1.02
CMKLR1Q99788 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC21.44■■□□□ 1.02
CMKLR1Q99788 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms