Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.83■□□□□ 0.6
CCL13Q99616 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CCL13Q99616 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
CCL13Q99616 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL13Q99616 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL13Q99616 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCL13Q99616 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCL13Q99616 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC18.82■□□□□ 0.6
CCL13Q99616 RASSF1-AS1-201ENST00000629828 790 ntBASIC18.82■□□□□ 0.6
CCL13Q99616 CDC20-202ENST00000372462 1777 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
CCL13Q99616 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCL13Q99616 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCL13Q99616 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
CCL13Q99616 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
CCL13Q99616 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
CCL13Q99616 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.81■□□□□ 0.6
CCL13Q99616 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL13Q99616 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCL13Q99616 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.81■□□□□ 0.6
CCL13Q99616 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.81■□□□□ 0.6
CCL13Q99616 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL13Q99616 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.81■□□□□ 0.6
CCL13Q99616 FAM228B-208ENST00000613899 1238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL13Q99616 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL13Q99616 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL13Q99616 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL13Q99616 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.81■□□□□ 0.6
CCL13Q99616 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL13Q99616 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL13Q99616 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCL13Q99616 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCL13Q99616 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL13Q99616 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
CCL13Q99616 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL13Q99616 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCL13Q99616 SIGLEC15-201ENST00000389474 1573 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCL13Q99616 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL13Q99616 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC18.8■□□□□ 0.6
CCL13Q99616 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC18.8■□□□□ 0.6
CCL13Q99616 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL13Q99616 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL13Q99616 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL13Q99616 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL13Q99616 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL13Q99616 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL13Q99616 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.79■□□□□ 0.6
CCL13Q99616 AC131281.2-201ENST00000520478 145 ntBASIC18.79■□□□□ 0.6
CCL13Q99616 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCL13Q99616 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC18.79■□□□□ 0.6
CCL13Q99616 AL512631.2-201ENST00000604634 923 ntBASIC18.79■□□□□ 0.6
CCL13Q99616 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.79■□□□□ 0.6
CCL13Q99616 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL13Q99616 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCL13Q99616 H19-210ENST00000439725 1929 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL13Q99616 RAP1B-207ENST00000450214 1466 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL13Q99616 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL13Q99616 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL13Q99616 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL13Q99616 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL13Q99616 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.78■□□□□ 0.6
CCL13Q99616 IL15RA-209ENST00000397255 759 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CCL13Q99616 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL13Q99616 IL15RA-216ENST00000530685 660 ntTSL 5 BASIC18.78■□□□□ 0.6
CCL13Q99616 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCL13Q99616 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
CCL13Q99616 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL13Q99616 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCL13Q99616 ANOS2P-203ENST00000472227 1816 ntBASIC18.77■□□□□ 0.6
CCL13Q99616 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.77■□□□□ 0.6
CCL13Q99616 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL13Q99616 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CCL13Q99616 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC18.77■□□□□ 0.6
CCL13Q99616 MIR4466-201ENST00000606121 54 ntBASIC18.77■□□□□ 0.6
CCL13Q99616 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC18.77■□□□□ 0.6
CCL13Q99616 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CCL13Q99616 AC008406.3-201ENST00000620001 1374 ntBASIC18.77■□□□□ 0.6
CCL13Q99616 MMP21-201ENST00000368808 1919 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL13Q99616 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCL13Q99616 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL13Q99616 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL13Q99616 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL13Q99616 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCL13Q99616 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.76■□□□□ 0.59
CCL13Q99616 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.76■□□□□ 0.59
CCL13Q99616 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.76■□□□□ 0.59
CCL13Q99616 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.76■□□□□ 0.59
CCL13Q99616 AC079630.1-202ENST00000618127 1840 ntBASIC18.76■□□□□ 0.59
CCL13Q99616 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CCL13Q99616 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CCL13Q99616 C7orf26-202ENST00000359073 1762 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CCL13Q99616 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
CCL13Q99616 C17orf82-201ENST00000623772 1530 ntBASIC18.75■□□□□ 0.59
CCL13Q99616 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL13Q99616 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
CCL13Q99616 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC18.75■□□□□ 0.59
CCL13Q99616 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCL13Q99616 AL136116.3-201ENST00000402907 1138 ntBASIC18.74■□□□□ 0.59
CCL13Q99616 ASB1-202ENST00000409297 878 ntTSL 5 BASIC18.74■□□□□ 0.59
CCL13Q99616 SRD5A1P1-201ENST00000442297 786 ntBASIC18.74■□□□□ 0.59
CCL13Q99616 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms