Protein–RNA interactions for Protein: Q8N2R8

FAM43A, Protein FAM43A, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM43AQ8N2R8 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC27.31■■□□□ 1.96
FAM43AQ8N2R8 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
FAM43AQ8N2R8 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
FAM43AQ8N2R8 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.3■■□□□ 1.96
FAM43AQ8N2R8 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
FAM43AQ8N2R8 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
FAM43AQ8N2R8 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
FAM43AQ8N2R8 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC27.3■■□□□ 1.96
FAM43AQ8N2R8 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
FAM43AQ8N2R8 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
FAM43AQ8N2R8 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC27.3■■□□□ 1.96
FAM43AQ8N2R8 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC27.3■■□□□ 1.96
FAM43AQ8N2R8 DDN-AS1-202ENST00000547866 2114 ntTSL 3 BASIC27.29■■□□□ 1.96
FAM43AQ8N2R8 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
FAM43AQ8N2R8 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC27.29■■□□□ 1.96
FAM43AQ8N2R8 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC27.29■■□□□ 1.96
FAM43AQ8N2R8 SRD5A1P1-201ENST00000442297 786 ntBASIC27.29■■□□□ 1.96
FAM43AQ8N2R8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
FAM43AQ8N2R8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
FAM43AQ8N2R8 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
FAM43AQ8N2R8 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC27.28■■□□□ 1.96
FAM43AQ8N2R8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC27.28■■□□□ 1.96
FAM43AQ8N2R8 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
FAM43AQ8N2R8 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC27.28■■□□□ 1.96
FAM43AQ8N2R8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
FAM43AQ8N2R8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
FAM43AQ8N2R8 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
FAM43AQ8N2R8 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
FAM43AQ8N2R8 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC27.27■■□□□ 1.96
FAM43AQ8N2R8 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
FAM43AQ8N2R8 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC27.27■■□□□ 1.96
FAM43AQ8N2R8 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
FAM43AQ8N2R8 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC27.27■■□□□ 1.96
FAM43AQ8N2R8 AL136967.2-201ENST00000623968 743 ntBASIC27.27■■□□□ 1.96
FAM43AQ8N2R8 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
FAM43AQ8N2R8 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
FAM43AQ8N2R8 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC27.27■■□□□ 1.96
FAM43AQ8N2R8 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC27.26■■□□□ 1.96
FAM43AQ8N2R8 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC27.26■■□□□ 1.95
FAM43AQ8N2R8 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
FAM43AQ8N2R8 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
FAM43AQ8N2R8 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.95
FAM43AQ8N2R8 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.26■■□□□ 1.95
FAM43AQ8N2R8 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
FAM43AQ8N2R8 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
FAM43AQ8N2R8 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
FAM43AQ8N2R8 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
FAM43AQ8N2R8 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
FAM43AQ8N2R8 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC27.25■■□□□ 1.95
FAM43AQ8N2R8 AF213884.3-201ENST00000563833 479 ntBASIC27.25■■□□□ 1.95
FAM43AQ8N2R8 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC27.25■■□□□ 1.95
FAM43AQ8N2R8 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
FAM43AQ8N2R8 LINGO3-201ENST00000585527 2241 ntAPPRIS P1 BASIC27.25■■□□□ 1.95
FAM43AQ8N2R8 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC27.25■■□□□ 1.95
FAM43AQ8N2R8 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC27.25■■□□□ 1.95
FAM43AQ8N2R8 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
FAM43AQ8N2R8 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
FAM43AQ8N2R8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
FAM43AQ8N2R8 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
FAM43AQ8N2R8 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
FAM43AQ8N2R8 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
FAM43AQ8N2R8 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
FAM43AQ8N2R8 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
FAM43AQ8N2R8 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.24■■□□□ 1.95
FAM43AQ8N2R8 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
FAM43AQ8N2R8 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
FAM43AQ8N2R8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
FAM43AQ8N2R8 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
FAM43AQ8N2R8 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
FAM43AQ8N2R8 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
FAM43AQ8N2R8 GRAMD4P4-201ENST00000613563 1115 ntBASIC27.23■■□□□ 1.95
FAM43AQ8N2R8 ANKRD20A6P-201ENST00000618763 204 ntBASIC27.23■■□□□ 1.95
FAM43AQ8N2R8 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC27.23■■□□□ 1.95
FAM43AQ8N2R8 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
FAM43AQ8N2R8 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
FAM43AQ8N2R8 SLC2A8-203ENST00000373371 2172 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
FAM43AQ8N2R8 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
FAM43AQ8N2R8 C1orf229-201ENST00000623686 2258 ntBASIC27.22■■□□□ 1.95
FAM43AQ8N2R8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC27.22■■□□□ 1.95
FAM43AQ8N2R8 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC27.22■■□□□ 1.95
FAM43AQ8N2R8 C9orf163-202ENST00000624034 2573 ntBASIC27.22■■□□□ 1.95
FAM43AQ8N2R8 DMRT2-209ENST00000635183 2190 ntTSL 5 BASIC27.22■■□□□ 1.95
FAM43AQ8N2R8 LINC01124-201ENST00000409786 2117 ntBASIC27.22■■□□□ 1.95
FAM43AQ8N2R8 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC27.22■■□□□ 1.95
FAM43AQ8N2R8 WRNIP1-203ENST00000380771 2595 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
FAM43AQ8N2R8 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
FAM43AQ8N2R8 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
FAM43AQ8N2R8 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC27.21■■□□□ 1.95
FAM43AQ8N2R8 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC27.21■■□□□ 1.95
FAM43AQ8N2R8 AC090877.2-201ENST00000558441 1738 ntBASIC27.21■■□□□ 1.95
FAM43AQ8N2R8 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
FAM43AQ8N2R8 GATM-206ENST00000558336 1522 ntTSL 2 BASIC27.21■■□□□ 1.95
FAM43AQ8N2R8 STK25-234ENST00000535007 2459 ntTSL 2 BASIC27.21■■□□□ 1.95
FAM43AQ8N2R8 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
FAM43AQ8N2R8 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
FAM43AQ8N2R8 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC27.2■■□□□ 1.95
FAM43AQ8N2R8 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
FAM43AQ8N2R8 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
FAM43AQ8N2R8 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC27.2■■□□□ 1.94
FAM43AQ8N2R8 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 16.5 ms