Protein–RNA interactions for Protein: P56703

WNT3, Proto-oncogene Wnt-3, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3P56703 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC21.35■■□□□ 1.01
WNT3P56703 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
WNT3P56703 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.35■■□□□ 1.01
WNT3P56703 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
WNT3P56703 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
WNT3P56703 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
WNT3P56703 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
WNT3P56703 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
WNT3P56703 HES6-204ENST00000409182 863 ntTSL 2 BASIC21.34■■□□□ 1.01
WNT3P56703 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.34■■□□□ 1.01
WNT3P56703 RNF146-205ENST00000477776 762 ntTSL 3 BASIC21.34■■□□□ 1.01
WNT3P56703 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC21.34■■□□□ 1.01
WNT3P56703 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
WNT3P56703 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
WNT3P56703 DALRD3-206ENST00000441576 1706 ntTSL 1 (best) BASIC21.33■■□□□ 1.01
WNT3P56703 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC21.33■■□□□ 1.01
WNT3P56703 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
WNT3P56703 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
WNT3P56703 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
WNT3P56703 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
WNT3P56703 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC21.32■■□□□ 1
WNT3P56703 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
WNT3P56703 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC21.32■■□□□ 1
WNT3P56703 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
WNT3P56703 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC21.32■■□□□ 1
WNT3P56703 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC21.32■■□□□ 1
WNT3P56703 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
WNT3P56703 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
WNT3P56703 GRK4-206ENST00000504933 1971 ntTSL 1 (best) BASIC21.32■■□□□ 1
WNT3P56703 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC21.31■■□□□ 1
WNT3P56703 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
WNT3P56703 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
WNT3P56703 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
WNT3P56703 GUSBP5-201ENST00000418136 578 ntBASIC21.31■■□□□ 1
WNT3P56703 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
WNT3P56703 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
WNT3P56703 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
WNT3P56703 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.31■■□□□ 1
WNT3P56703 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
WNT3P56703 USF2-207ENST00000595068 1612 ntTSL 5 BASIC21.3■■□□□ 1
WNT3P56703 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
WNT3P56703 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC21.3■■□□□ 1
WNT3P56703 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
WNT3P56703 AC239859.2-201ENST00000444165 318 ntBASIC21.3■■□□□ 1
WNT3P56703 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.3■■□□□ 1
WNT3P56703 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC21.3■■□□□ 1
WNT3P56703 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
WNT3P56703 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC21.3■■□□□ 1
WNT3P56703 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
WNT3P56703 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
WNT3P56703 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC21.29■■□□□ 1
WNT3P56703 GAS2L1-201ENST00000406549 1803 ntTSL 1 (best) BASIC21.29■■□□□ 1
WNT3P56703 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC21.29■■□□□ 1
WNT3P56703 TERT-206ENST00000508104 2486 ntTSL 5 BASIC21.29■■□□□ 1
WNT3P56703 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
WNT3P56703 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC21.29■■□□□ 1
WNT3P56703 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
WNT3P56703 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
WNT3P56703 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC21.29■■□□□ 1
WNT3P56703 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC21.29■■□□□ 1
WNT3P56703 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
WNT3P56703 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC21.29■■□□□ 1
WNT3P56703 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3P56703 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3P56703 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3P56703 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.28■■□□□ 1
WNT3P56703 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC21.28■■□□□ 1
WNT3P56703 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
WNT3P56703 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC21.28■■□□□ 1
WNT3P56703 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3P56703 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
WNT3P56703 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.27■■□□□ 1
WNT3P56703 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
WNT3P56703 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC21.27■■□□□ 1
WNT3P56703 COMT-203ENST00000403184 2217 ntTSL 2 BASIC21.27■■□□□ 1
WNT3P56703 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC21.27■■□□□ 1
WNT3P56703 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC21.27■■□□□ 1
WNT3P56703 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.27■■□□□ 1
WNT3P56703 SNX5-217ENST00000606557 1087 ntBASIC21.27■■□□□ 1
WNT3P56703 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.27■■□□□ 1
WNT3P56703 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
WNT3P56703 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
WNT3P56703 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
WNT3P56703 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
WNT3P56703 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
WNT3P56703 EP400NL-214ENST00000641289 2402 ntBASIC21.26■□□□□ 0.99
WNT3P56703 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
WNT3P56703 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.26■□□□□ 0.99
WNT3P56703 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC21.25■□□□□ 0.99
WNT3P56703 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
WNT3P56703 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
WNT3P56703 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
WNT3P56703 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
WNT3P56703 LSM7-203ENST00000585409 512 ntTSL 2 BASIC21.25■□□□□ 0.99
WNT3P56703 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC21.25■□□□□ 0.99
WNT3P56703 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
WNT3P56703 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
WNT3P56703 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
WNT3P56703 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
WNT3P56703 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms