Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC28.8■■■□□ 2.2
ABCC4O15439 GATM-206ENST00000558336 1522 ntTSL 2 BASIC28.8■■■□□ 2.2
ABCC4O15439 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
ABCC4O15439 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC28.8■■■□□ 2.2
ABCC4O15439 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC28.8■■■□□ 2.2
ABCC4O15439 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ABCC4O15439 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC28.8■■■□□ 2.2
ABCC4O15439 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC28.8■■■□□ 2.2
ABCC4O15439 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.8■■■□□ 2.2
ABCC4O15439 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC28.8■■■□□ 2.2
ABCC4O15439 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
ABCC4O15439 UBL7-202ENST00000395081 1427 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ABCC4O15439 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ABCC4O15439 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC28.8■■■□□ 2.2
ABCC4O15439 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC28.8■■■□□ 2.2
ABCC4O15439 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
ABCC4O15439 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ABCC4O15439 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
ABCC4O15439 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ABCC4O15439 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.79■■■□□ 2.2
ABCC4O15439 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
ABCC4O15439 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
ABCC4O15439 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC28.78■■■□□ 2.2
ABCC4O15439 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC28.78■■■□□ 2.2
ABCC4O15439 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
ABCC4O15439 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
ABCC4O15439 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC28.78■■■□□ 2.2
ABCC4O15439 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC28.77■■■□□ 2.2
ABCC4O15439 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.77■■■□□ 2.2
ABCC4O15439 EDA-201ENST00000338901 1233 ntBASIC28.77■■■□□ 2.2
ABCC4O15439 AC005703.6-201ENST00000623265 1329 ntBASIC28.77■■■□□ 2.2
ABCC4O15439 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC28.77■■■□□ 2.2
ABCC4O15439 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
ABCC4O15439 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.2
ABCC4O15439 AC026271.2-201ENST00000428091 497 ntBASIC28.76■■■□□ 2.19
ABCC4O15439 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC28.76■■■□□ 2.19
ABCC4O15439 AC112229.4-201ENST00000488671 1528 ntTSL 2 BASIC28.76■■■□□ 2.19
ABCC4O15439 RASEF-201ENST00000340717 1765 ntTSL 2 BASIC28.76■■■□□ 2.19
ABCC4O15439 SETD9-201ENST00000285947 1619 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ABCC4O15439 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
ABCC4O15439 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ABCC4O15439 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
ABCC4O15439 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
ABCC4O15439 CDKN2A-210ENST00000530628 748 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
ABCC4O15439 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
ABCC4O15439 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
ABCC4O15439 UROS-204ENST00000368797 1313 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ABCC4O15439 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ABCC4O15439 AL117348.2-201ENST00000432920 1625 ntAPPRIS P1 TSL 2 BASIC28.75■■■□□ 2.19
ABCC4O15439 H19-210ENST00000439725 1929 ntTSL 2 BASIC28.75■■■□□ 2.19
ABCC4O15439 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
ABCC4O15439 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
ABCC4O15439 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC28.75■■■□□ 2.19
ABCC4O15439 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC28.74■■■□□ 2.19
ABCC4O15439 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC28.74■■■□□ 2.19
ABCC4O15439 AL355001.2-201ENST00000620617 1191 ntBASIC28.74■■■□□ 2.19
ABCC4O15439 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC28.74■■■□□ 2.19
ABCC4O15439 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.74■■■□□ 2.19
ABCC4O15439 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC28.73■■■□□ 2.19
ABCC4O15439 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC28.73■■■□□ 2.19
ABCC4O15439 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC28.73■■■□□ 2.19
ABCC4O15439 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC28.73■■■□□ 2.19
ABCC4O15439 AC064853.3-201ENST00000641801 1658 ntAPPRIS P1 BASIC28.73■■■□□ 2.19
ABCC4O15439 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC28.73■■■□□ 2.19
ABCC4O15439 LGR4-203ENST00000480977 492 ntTSL 2 BASIC28.72■■■□□ 2.19
ABCC4O15439 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.72■■■□□ 2.19
ABCC4O15439 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC28.72■■■□□ 2.19
ABCC4O15439 SPG21-202ENST00000416889 1533 ntTSL 2 BASIC28.72■■■□□ 2.19
ABCC4O15439 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC28.72■■■□□ 2.19
ABCC4O15439 ENTPD4-201ENST00000356206 2097 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ABCC4O15439 ENTPD4-203ENST00000417069 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ABCC4O15439 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
ABCC4O15439 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
ABCC4O15439 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.71■■■□□ 2.19
ABCC4O15439 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC28.71■■■□□ 2.19
ABCC4O15439 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCC4O15439 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCC4O15439 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.71■■■□□ 2.19
ABCC4O15439 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCC4O15439 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC28.71■■■□□ 2.19
ABCC4O15439 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
ABCC4O15439 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
ABCC4O15439 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
ABCC4O15439 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
ABCC4O15439 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC28.7■■■□□ 2.18
ABCC4O15439 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ABCC4O15439 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
ABCC4O15439 METTL9-202ENST00000396014 1817 ntAPPRIS ALT1 TSL 1 (best) BASIC28.69■■■□□ 2.18
ABCC4O15439 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC28.69■■■□□ 2.18
ABCC4O15439 ANOS2P-203ENST00000472227 1816 ntBASIC28.69■■■□□ 2.18
ABCC4O15439 HYI-206ENST00000372434 1025 ntTSL 5 BASIC28.69■■■□□ 2.18
ABCC4O15439 AC105265.2-201ENST00000467189 838 ntBASIC28.69■■■□□ 2.18
ABCC4O15439 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28.69■■■□□ 2.18
ABCC4O15439 AF213884.3-201ENST00000563833 479 ntBASIC28.69■■■□□ 2.18
ABCC4O15439 AL136967.2-201ENST00000623968 743 ntBASIC28.69■■■□□ 2.18
ABCC4O15439 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC28.68■■■□□ 2.18
ABCC4O15439 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC28.68■■■□□ 2.18
ABCC4O15439 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC28.68■■■□□ 2.18
ABCC4O15439 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC28.68■■■□□ 2.18
ABCC4O15439 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC28.68■■■□□ 2.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms