Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 M6PR-213ENST00000544245 660 ntTSL 217.64■□□□□ 0.413e-6■□□□□ 9.2
EIF3DO15371 RAI1-204ENST00000489697 1570 ntTSL 317.48■□□□□ 0.393e-6■□□□□ 9.2
EIF3DO15371 CDC42BPB-204ENST00000559043 1999 ntTSL 517.24■□□□□ 0.353e-6■□□□□ 9.2
EIF3DO15371 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC17.06■□□□□ 0.323e-6■□□□□ 9.2
EIF3DO15371 DLGAP4-AS1-201ENST00000425233 443 ntTSL 516.96■□□□□ 0.313e-6■□□□□ 9.2
EIF3DO15371 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC16.64■□□□□ 0.253e-6■□□□□ 9.2
EIF3DO15371 NOP2-213ENST00000542015 1002 ntTSL 316.52■□□□□ 0.243e-6■□□□□ 9.2
EIF3DO15371 NOP2-221ENST00000546053 508 ntTSL 316.51■□□□□ 0.233e-6■□□□□ 9.2
EIF3DO15371 NOP2-205ENST00000536124 689 ntTSL 516.15■□□□□ 0.183e-6■□□□□ 9.2
EIF3DO15371 CDC42BPB-209ENST00000634889 507 ntTSL 316.13■□□□□ 0.173e-6■□□□□ 9.2
EIF3DO15371 HSPG2-214ENST00000635682 921 ntTSL 516.08■□□□□ 0.163e-6■□□□□ 9.2
EIF3DO15371 NOP2-220ENST00000545915 630 ntTSL 2 BASIC16.06■□□□□ 0.163e-6■□□□□ 9.2
EIF3DO15371 M6PR-206ENST00000541507 2198 ntTSL 515.29■□□□□ 0.043e-6■□□□□ 9.2
EIF3DO15371 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.29■□□□□ 0.043e-6■□□□□ 9.2
EIF3DO15371 NXN-209ENST00000575455 914 ntTSL 1 (best)15.25■□□□□ 0.033e-6■□□□□ 9.2
EIF3DO15371 NOP2-209ENST00000538420 572 ntTSL 414.45□□□□□ -0.13e-6■□□□□ 9.2
EIF3DO15371 NOP2-212ENST00000541778 3038 ntTSL 2 BASIC14.41□□□□□ -0.13e-6■□□□□ 9.2
EIF3DO15371 STMN3-204ENST00000632676 519 ntTSL 414.29□□□□□ -0.123e-6■□□□□ 9.2
EIF3DO15371 RAI1-203ENST00000471135 570 ntTSL 314.16□□□□□ -0.143e-6■□□□□ 9.2
EIF3DO15371 SCOC-210ENST00000608372 5129 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.183e-6■□□□□ 9.2
EIF3DO15371 NXN-212ENST00000577098 659 ntTSL 313.87□□□□□ -0.193e-6■□□□□ 9.2
EIF3DO15371 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC13.62□□□□□ -0.233e-6■□□□□ 9.2
EIF3DO15371 DLGAP4-AS1-203ENST00000439595 1207 ntTSL 1 (best) BASIC13.51□□□□□ -0.253e-6■□□□□ 9.2
EIF3DO15371 M6PR-209ENST00000543704 616 ntTSL 313.51□□□□□ -0.253e-6■□□□□ 9.2
EIF3DO15371 NOP2-201ENST00000322166 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.273e-6■□□□□ 9.2
EIF3DO15371 NOP2-203ENST00000399466 2701 ntTSL 1 (best) BASIC13.18□□□□□ -0.33e-6■□□□□ 9.2
EIF3DO15371 SYPL1-201ENST00000011473 2127 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.33e-6■□□□□ 9.2
EIF3DO15371 M6PR-201ENST00000000412 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.313e-6■□□□□ 9.2
EIF3DO15371 CDCA8-201ENST00000327331 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.383e-6■□□□□ 9.2
EIF3DO15371 M6PR-205ENST00000540837 648 ntTSL 212.58□□□□□ -0.43e-6■□□□□ 9.2
EIF3DO15371 NOP2-223ENST00000620535 2791 ntTSL 1 (best) BASIC12.51□□□□□ -0.413e-6■□□□□ 9.2
EIF3DO15371 SYPL1-202ENST00000455385 2151 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.523e-6■□□□□ 9.2
EIF3DO15371 M6PR-207ENST00000543159 720 ntTSL 210.91□□□□□ -0.663e-6■□□□□ 9.2
EIF3DO15371 NOP2-207ENST00000537442 2613 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.73e-6■□□□□ 9.2
EIF3DO15371 USP34-218ENST00000490552 1793 ntTSL 210.46□□□□□ -0.743e-6■□□□□ 9.2
EIF3DO15371 CDCA8-202ENST00000373055 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.753e-6■□□□□ 9.2
EIF3DO15371 NOP2-218ENST00000545200 2751 ntTSL 1 (best) BASIC10.37□□□□□ -0.753e-6■□□□□ 9.2
EIF3DO15371 NOP2-202ENST00000382421 2736 ntTSL 1 (best) BASIC10.13□□□□□ -0.793e-6■□□□□ 9.2
EIF3DO15371 STMN3-205ENST00000634126 605 ntTSL 39.99□□□□□ -0.813e-6■□□□□ 9.2
EIF3DO15371 NXN-205ENST00000571338 586 ntTSL 48.69□□□□□ -1.023e-6■□□□□ 9.2
EIF3DO15371 SCOC-204ENST00000394205 1964 ntTSL 2 BASIC7.29□□□□□ -1.243e-6■□□□□ 9.2
EIF3DO15371 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC6.49□□□□□ -1.373e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC6.12□□□□□ -1.433e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC5.47□□□□□ -1.533e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-218ENST00000487294 587 ntTSL 35.34□□□□□ -1.553e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-204ENST00000410054 4442 ntTSL 2 BASIC5.34□□□□□ -1.563e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.573e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-206ENST00000429703 3443 ntTSL 54.08□□□□□ -1.763e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC3.92□□□□□ -1.783e-6■□□□□ 9.2
EIF3DO15371 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.91□□□□□ -1.783e-6■□□□□ 9.2
EIF3DO15371 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC3.85□□□□□ -1.793e-6■□□□□ 9.2
EIF3DO15371 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.52□□□□□ -1.853e-6■□□□□ 9.2
EIF3DO15371 USP34-222ENST00000498268 497 ntTSL 33.3□□□□□ -1.883e-6■□□□□ 9.2
EIF3DO15371 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC3.25□□□□□ -1.893e-6■□□□□ 9.2
EIF3DO15371 R3HDM1-205ENST00000425804 581 ntTSL 22.44□□□□□ -2.023e-6■□□□□ 9.2
EIF3DO15371 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC2.18□□□□□ -2.063e-6■□□□□ 9.2
EIF3DO15371 FANCA-231ENST00000568626 727 ntTSL 313.21□□□□□ -0.294e-7■□□□□ 9.2
EIF3DO15371 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.487e-8■□□□□ 9.2
EIF3DO15371 MACF1-213ENST00000469490 842 ntTSL 55.07□□□□□ -1.63e-6■□□□□ 9.2
EIF3DO15371 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.42e-6■□□□□ 9.2
EIF3DO15371 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.442e-6■□□□□ 9.2
EIF3DO15371 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.562e-6■□□□□ 9.2
EIF3DO15371 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC11.42□□□□□ -0.582e-6■□□□□ 9.2
EIF3DO15371 MACF1-207ENST00000442046 2299 ntTSL 515□□□□□ -0.013e-8■□□□□ 9.2
EIF3DO15371 MACF1-202ENST00000360115 2824 ntTSL 514.43□□□□□ -0.13e-8■□□□□ 9.2
EIF3DO15371 MACF1-208ENST00000446276 2559 ntTSL 513□□□□□ -0.333e-8■□□□□ 9.2
EIF3DO15371 MACF1-216ENST00000476350 5304 ntTSL 29□□□□□ -0.973e-8■□□□□ 9.2
EIF3DO15371 MACF1-206ENST00000422234 477 ntTSL 58.39□□□□□ -1.073e-8■□□□□ 9.2
EIF3DO15371 MACF1-226ENST00000497964 4160 ntTSL 27.6□□□□□ -1.193e-8■□□□□ 9.2
EIF3DO15371 MACF1-210ENST00000462496 526 ntTSL 35.57□□□□□ -1.523e-8■□□□□ 9.2
EIF3DO15371 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC16.53■□□□□ 0.242e-9■□□□□ 9.2
EIF3DO15371 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.162e-9■□□□□ 9.2
EIF3DO15371 GPC3-204ENST00000631057 1581 ntTSL 1 (best) BASIC8.84□□□□□ -0.992e-9■□□□□ 9.2
EIF3DO15371 SLMAP-218ENST00000481846 556 ntTSL 421.26■□□□□ 0.992e-8■□□□□ 9.1
EIF3DO15371 HIST1H3D-203ENST00000635641 1637 ntTSL 519.75■□□□□ 0.754e-30■□□□□ 9.1
EIF3DO15371 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.732e-8■□□□□ 9.1
EIF3DO15371 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.354e-30■□□□□ 9.1
EIF3DO15371 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC15.09■□□□□ 0.014e-30■□□□□ 9.1
EIF3DO15371 C20orf24-205ENST00000491113 734 ntTSL 228.42■■■□□ 2.142e-18■□□□□ 9.1
EIF3DO15371 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC26.3■■□□□ 1.82e-18■□□□□ 9.1
EIF3DO15371 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.82e-18■□□□□ 9.1
EIF3DO15371 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.22■■□□□ 1.792e-18■□□□□ 9.1
EIF3DO15371 C20orf24-206ENST00000492721 1044 ntTSL 223.1■■□□□ 1.292e-18■□□□□ 9.1
EIF3DO15371 C20orf24-204ENST00000483815 1170 ntTSL 1 (best)19.32■□□□□ 0.682e-18■□□□□ 9.1
EIF3DO15371 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.382e-18■□□□□ 9.1
EIF3DO15371 APOC1-208ENST00000592535 430 ntTSL 1 (best)15□□□□□ -0.012e-6■□□□□ 9.1
EIF3DO15371 AC011481.3-201ENST00000623895 5594 ntBASIC14.29□□□□□ -0.122e-6■□□□□ 9.1
EIF3DO15371 APOC1-209ENST00000592885 562 ntTSL 3 BASIC14.29□□□□□ -0.122e-6■□□□□ 9.1
EIF3DO15371 APOC1-203ENST00000588802 553 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.612e-6■□□□□ 9.1
EIF3DO15371 APOC1-205ENST00000589781 273 ntTSL 3 BASIC11.21□□□□□ -0.612e-6■□□□□ 9.1
EIF3DO15371 APOC1-202ENST00000588750 689 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.972e-6■□□□□ 9.1
EIF3DO15371 RALY-202ENST00000333552 786 ntTSL 323.21■■□□□ 1.313e-11■□□□□ 9.1
EIF3DO15371 ODC1-204ENST00000446285 665 ntTSL 528.81■■■□□ 2.27e-9■□□□□ 9.1
EIF3DO15371 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.177e-9■□□□□ 9.1
EIF3DO15371 PCNX3-202ENST00000439247 3104 ntTSL 1 (best)14.4□□□□□ -0.13e-7■□□□□ 9.1
EIF3DO15371 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC28.87■■■□□ 2.211e-9■□□□□ 9.1
EIF3DO15371 PSME3-204ENST00000543428 956 ntTSL 223.13■■□□□ 1.298e-8■□□□□ 9.1
EIF3DO15371 PSME3-207ENST00000586114 580 ntTSL 422■■□□□ 1.118e-8■□□□□ 9.1
EIF3DO15371 PSME3-211ENST00000591152 1018 ntTSL 321.8■■□□□ 1.088e-8■□□□□ 9.1
EIF3DO15371 PSME3-209ENST00000589469 733 ntTSL 321.8■■□□□ 1.088e-8■□□□□ 9.1
Retrieved 100 of 4,069 protein–RNA pairs in 307.8 ms