RNA–Protein interactions for RNA: ENST00000410054.5

R3HDM1-204, Transcript of R3H domain containing 1, humanhuman

TSL 2 BASIC

Gene R3HDM1, Length 4,442 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-204ENST00000410054 MYT1Q01538 1121 aa9.62□□□□□ -0.87
R3HDM1-204ENST00000410054 PELP1Q8IZL8 1130 aaKnown RBP9.36□□□□□ -0.91
R3HDM1-204ENST00000410054 SLC24A1O60721 1099 aa9.17□□□□□ -0.94
R3HDM1-204ENST00000410054 ERICH6Q7L0X2 663 aa9.08□□□□□ -0.96
R3HDM1-204ENST00000410054 TTBK1Q5TCY1 1321 aaPredicted RBP9.05□□□□□ -0.96
R3HDM1-204ENST00000410054 RANGAP1P46060 587 aaPredicted RBP8.86□□□□□ -0.99
R3HDM1-204ENST00000410054 EHMT2Q96KQ7 1210 aa8.82□□□□□ -1
R3HDM1-204ENST00000410054 DAXXQ9UER7 740 aaPredicted RBP8.4□□□□□ -1.06
R3HDM1-204ENST00000410054 EIF5BO60841 1220 aaKnown RBP8.35□□□□□ -1.07
R3HDM1-204ENST00000410054 YTHDC1Q96MU7 727 aaKnown RBP8.18□□□□□ -1.1
R3HDM1-204ENST00000410054 DCAF8L2P0C7V8 631 aa8.17□□□□□ -1.1
R3HDM1-204ENST00000410054 CENPBP07199 599 aaPredicted RBP8.16□□□□□ -1.1
R3HDM1-204ENST00000410054 POLR3GLQ9BT43 218 aa8.12□□□□□ -1.11
R3HDM1-204ENST00000410054 PRKCSHP14314 528 aaPredicted RBP8.12□□□□□ -1.11
R3HDM1-204ENST00000410054 GLIPR1L2Q4G1C9 344 aa8.05□□□□□ -1.12
R3HDM1-204ENST00000410054 AMER1Q5JTC6 1135 aaPredicted RBP8.03□□□□□ -1.12
R3HDM1-204ENST00000410054 RTN4Q9NQC3 1192 aaKnown RBP8.02□□□□□ -1.13
R3HDM1-204ENST00000410054 PODXL2Q9NZ53 605 aa8□□□□□ -1.13
R3HDM1-204ENST00000410054 HOMEZQ8IX15 550 aa7.99□□□□□ -1.13
R3HDM1-204ENST00000410054 NEFLP07196 543 aa7.97□□□□□ -1.13
R3HDM1-204ENST00000410054 NCBP3Q53F19 620 aaKnown RBP7.97□□□□□ -1.13
R3HDM1-204ENST00000410054 CCER1Q8TC90 406 aaPredicted RBP7.97□□□□□ -1.13
R3HDM1-204ENST00000410054 TULP1O00294 542 aaPredicted RBP7.95□□□□□ -1.14
R3HDM1-204ENST00000410054 FAM9AQ8IZU1 332 aaPredicted RBP7.93□□□□□ -1.14
R3HDM1-204ENST00000410054 BCL11AQ9H165 835 aa7.92□□□□□ -1.14
R3HDM1-204ENST00000410054 PLPPR3Q6T4P5 718 aa7.91□□□□□ -1.14
R3HDM1-204ENST00000410054 C14orf37Q86TY3 774 aa7.89□□□□□ -1.15
R3HDM1-204ENST00000410054 MYT1LQ9UL68 1186 aa7.88□□□□□ -1.15
R3HDM1-204ENST00000410054 ARXQ96QS3 562 aa7.87□□□□□ -1.15
R3HDM1-204ENST00000410054 APLP2Q06481 763 aa7.87□□□□□ -1.15
R3HDM1-204ENST00000410054 HAP1P54257 671 aaPredicted RBP7.87□□□□□ -1.15
R3HDM1-204ENST00000410054 CDK11BP21127 795 aaKnown RBP7.82□□□□□ -1.16
R3HDM1-204ENST00000410054 CDK11AQ9UQ88 783 aaPredicted RBP7.82□□□□□ -1.16
R3HDM1-204ENST00000410054 TPRNQ4KMQ1 711 aa7.81□□□□□ -1.16
R3HDM1-204ENST00000410054 RTL5Q5HYW3 569 aaPredicted RBP7.81□□□□□ -1.16
R3HDM1-204ENST00000410054 NPM2Q86SE8 214 aaKnown RBP7.79□□□□□ -1.16
R3HDM1-204ENST00000410054 BCANQ96GW7 911 aa7.78□□□□□ -1.16
R3HDM1-204ENST00000410054 CHIC1Q5VXU3 224 aa7.76□□□□□ -1.17
R3HDM1-204ENST00000410054 CLSPNQ9HAW4 1339 aa7.74□□□□□ -1.17
R3HDM1-204ENST00000410054 ZNF326Q5BKZ1 582 aaKnown RBP7.73□□□□□ -1.17
R3HDM1-204ENST00000410054 ZEB1P37275 1124 aaPredicted RBP7.7□□□□□ -1.18
R3HDM1-204ENST00000410054 HMGB1P09429 215 aaKnown RBP7.67□□□□□ -1.18
R3HDM1-204ENST00000410054 A0A0U1RQG5 324 aaPredicted RBP7.64□□□□□ -1.19
R3HDM1-204ENST00000410054 TIMELESSQ9UNS1 1208 aa7.64□□□□□ -1.19
R3HDM1-204ENST00000410054 PDE4CQ08493 712 aa7.62□□□□□ -1.19
R3HDM1-204ENST00000410054 SUPT5HO00267 1087 aaKnown RBP7.61□□□□□ -1.19
R3HDM1-204ENST00000410054 PTMSP20962 102 aa7.59□□□□□ -1.19
R3HDM1-204ENST00000410054 PKNOX2Q96KN3 472 aa7.59□□□□□ -1.19
R3HDM1-204ENST00000410054 TAOK2Q9UL54 1235 aa7.58□□□□□ -1.2
R3HDM1-204ENST00000410054 PDIA4P13667 645 aaKnown RBP7.56□□□□□ -1.2
R3HDM1-204ENST00000410054 KLHL34Q8N239 644 aa7.56□□□□□ -1.2
R3HDM1-204ENST00000410054 ARID3AQ99856 593 aa7.55□□□□□ -1.2
R3HDM1-204ENST00000410054 GTF3C3Q9Y5Q9 886 aa7.54□□□□□ -1.2
R3HDM1-204ENST00000410054 ARID4BQ4LE39 1312 aaPredicted RBP7.53□□□□□ -1.2
R3HDM1-204ENST00000410054 PLEKHG5O94827 1062 aa7.51□□□□□ -1.21
R3HDM1-204ENST00000410054 NISCHQ9Y2I1 1504 aa7.5□□□□□ -1.21
R3HDM1-204ENST00000410054 NAP1L5Q96NT1 182 aaPredicted RBP7.5□□□□□ -1.21
R3HDM1-204ENST00000410054 NCLP19338 710 aaKnown RBP7.48□□□□□ -1.21
R3HDM1-204ENST00000410054 KCNA4P22459 653 aa7.47□□□□□ -1.21
R3HDM1-204ENST00000410054 NBR1Q14596 966 aa7.46□□□□□ -1.22
R3HDM1-204ENST00000410054 ZNF526Q8TF50 670 aaPredicted RBP7.45□□□□□ -1.22
R3HDM1-204ENST00000410054 CCDC9Q9Y3X0 531 aaKnown RBP7.44□□□□□ -1.22
R3HDM1-204ENST00000410054 ANP32EQ9BTT0 268 aa7.43□□□□□ -1.22
R3HDM1-204ENST00000410054 SLC4A1APQ9BWU0 796 aaKnown RBP7.43□□□□□ -1.22
R3HDM1-204ENST00000410054 TAF7LQ5H9L4 462 aa7.43□□□□□ -1.22
R3HDM1-204ENST00000410054 HSP90B1P14625 803 aaKnown RBP7.42□□□□□ -1.22
R3HDM1-204ENST00000410054 FBXO3Q9UK99 471 aa7.42□□□□□ -1.22
R3HDM1-204ENST00000410054 TNNT2P45379 298 aaPredicted RBP7.4□□□□□ -1.22
R3HDM1-204ENST00000410054 CCDC136Q96JN2 1154 aa7.39□□□□□ -1.23
R3HDM1-204ENST00000410054 BRD2P25440 801 aaKnown RBP7.38□□□□□ -1.23
R3HDM1-204ENST00000410054 ZBTB7CA1YPR0 619 aa7.36□□□□□ -1.23
R3HDM1-204ENST00000410054 ZNF316A6NFI3 1004 aaPredicted RBP7.35□□□□□ -1.23
R3HDM1-204ENST00000410054 UBE2Q2Q8WVN8 375 aa7.35□□□□□ -1.23
R3HDM1-204ENST00000410054 APPP05067 770 aa7.32□□□□□ -1.24
R3HDM1-204ENST00000410054 CNGB1Q14028 1251 aaPredicted RBP7.32□□□□□ -1.24
R3HDM1-204ENST00000410054 HRCP23327 699 aa7.32□□□□□ -1.24
R3HDM1-204ENST00000410054 USP35Q9P2H5 1018 aa7.32□□□□□ -1.24
R3HDM1-204ENST00000410054 LAS1LQ9Y4W2 734 aaKnown RBP7.3□□□□□ -1.24
R3HDM1-204ENST00000410054 VSIG10Q8N0Z9 540 aa7.3□□□□□ -1.24
R3HDM1-204ENST00000410054 CSRNP3Q8WYN3 585 aa7.28□□□□□ -1.24
R3HDM1-204ENST00000410054 DHX37Q8IY37 1157 aaKnown RBP7.28□□□□□ -1.24
R3HDM1-204ENST00000410054 CHMP4AQ9BY43 222 aa7.28□□□□□ -1.24
R3HDM1-204ENST00000410054 ERICH6BQ5W0A0 696 aa7.28□□□□□ -1.24
R3HDM1-204ENST00000410054 DEKP35659 375 aaKnown RBP7.27□□□□□ -1.25
R3HDM1-204ENST00000410054 CFAP44Q96MT7 982 aa7.27□□□□□ -1.25
R3HDM1-204ENST00000410054 PSMD1Q99460 953 aa7.26□□□□□ -1.25
R3HDM1-204ENST00000410054 PPM1GO15355 546 aaPredicted RBP7.26□□□□□ -1.25
R3HDM1-204ENST00000410054 PATL2C9JE40 543 aaKnown RBP7.25□□□□□ -1.25
R3HDM1-204ENST00000410054 PLCB2Q00722 1185 aa7.24□□□□□ -1.25
R3HDM1-204ENST00000410054 TRIM44Q96DX7 344 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-204ENST00000410054 PTMAP06454 111 aaKnown RBP7.24□□□□□ -1.25
R3HDM1-204ENST00000410054 ZBTB4Q9P1Z0 1013 aaPredicted RBP7.24□□□□□ -1.25
R3HDM1-204ENST00000410054 CALRP27797 417 aaKnown RBP7.22□□□□□ -1.25
R3HDM1-204ENST00000410054 ATP1B4Q9UN42 357 aaPredicted RBP7.21□□□□□ -1.25
R3HDM1-204ENST00000410054 BCL11BQ9C0K0 894 aaPredicted RBP7.2□□□□□ -1.26
R3HDM1-204ENST00000410054 PAXIP1Q6ZW49 1069 aaPredicted RBP7.2□□□□□ -1.26
R3HDM1-204ENST00000410054 FKBP8Q14318 412 aa7.19□□□□□ -1.26
R3HDM1-204ENST00000410054 ANP32BQ92688 251 aaKnown RBP7.19□□□□□ -1.26
R3HDM1-204ENST00000410054 ANO8Q9HCE9 1232 aaPredicted RBP7.19□□□□□ -1.26
R3HDM1-204ENST00000410054 ACIN1Q9UKV3 1341 aaKnown RBP7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms