RNA–Protein interactions for RNA: ENST00000498268.1

USP34-222, Transcript of ubiquitin specific peptidase 34, humanhuman

TSL 3

Gene USP34, Length 497 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP34-222ENST00000498268 AEBP2Q6ZN18 517 aaPredicted RBP27.04■■□□□ 1.92
USP34-222ENST00000498268 CHIC1Q5VXU3 224 aa25.74■■□□□ 1.71
USP34-222ENST00000498268 SENP3Q9H4L4 574 aaPredicted RBP22.86■■□□□ 1.25
USP34-222ENST00000498268 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
USP34-222ENST00000498268 FOXD1Q16676 465 aa21.41■■□□□ 1.02
USP34-222ENST00000498268 PLPPR3Q6T4P5 718 aa20.59■□□□□ 0.89
USP34-222ENST00000498268 PPP6R1Q9UPN7 881 aa20.23■□□□□ 0.83
USP34-222ENST00000498268 ADRA2BP18089 450 aa20.14■□□□□ 0.81
USP34-222ENST00000498268 PIAS4Q8N2W9 510 aaPredicted RBP19.98■□□□□ 0.79
USP34-222ENST00000498268 MSH5O43196 834 aa19.82■□□□□ 0.76
USP34-222ENST00000498268 POTEDQ86YR6 584 aa19.18■□□□□ 0.66
USP34-222ENST00000498268 MAPK8IP2Q13387 824 aaPredicted RBP18.5■□□□□ 0.55
USP34-222ENST00000498268 SCAF1Q9H7N4 1312 aaKnown RBP18.23■□□□□ 0.51
USP34-222ENST00000498268 DMRT2Q9Y5R5 561 aa18.2■□□□□ 0.5
USP34-222ENST00000498268 PPP4R3CPQ6ZMV5 832 aa18.14■□□□□ 0.49
USP34-222ENST00000498268 CNKSR2Q8WXI2 1034 aa17.7■□□□□ 0.42
USP34-222ENST00000498268 HOXD11P31277 338 aaPredicted RBP17.61■□□□□ 0.41
USP34-222ENST00000498268 RNF216Q9NWF9 866 aaPredicted RBP17.49■□□□□ 0.39
USP34-222ENST00000498268 DCAF8L1A6NGE4 600 aa17.45■□□□□ 0.38
USP34-222ENST00000498268 NCBP3Q53F19 620 aaKnown RBP17.37■□□□□ 0.37
USP34-222ENST00000498268 NPM3O75607 178 aaKnown RBP17.26■□□□□ 0.35
USP34-222ENST00000498268 KCNA4P22459 653 aa17.12■□□□□ 0.33
USP34-222ENST00000498268 RNF39Q9H2S5 420 aa17.01■□□□□ 0.31
USP34-222ENST00000498268 CACNB1Q02641 598 aaPredicted RBP16.96■□□□□ 0.31
USP34-222ENST00000498268 DNAJC5BQ9UF47 199 aa16.87■□□□□ 0.29
USP34-222ENST00000498268 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.75■□□□□ 0.27
USP34-222ENST00000498268 C1QBPQ07021 282 aaKnown RBP16.71■□□□□ 0.27
USP34-222ENST00000498268 SLC4A2P04920 1241 aa16.48■□□□□ 0.23
USP34-222ENST00000498268 U3KPZ7 1027 aaPredicted RBP16.48■□□□□ 0.23
USP34-222ENST00000498268 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
USP34-222ENST00000498268 SLC4A1APQ9BWU0 796 aaKnown RBP16.12■□□□□ 0.17
USP34-222ENST00000498268 CAPN15O75808 1086 aa16.11■□□□□ 0.17
USP34-222ENST00000498268 DSG3P32926 999 aa16.02■□□□□ 0.16
USP34-222ENST00000498268 TRHP20396 242 aaPredicted RBP15.92■□□□□ 0.14
USP34-222ENST00000498268 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.9■□□□□ 0.14
USP34-222ENST00000498268 HNRNPUL2Q1KMD3 747 aaKnown RBP15.9■□□□□ 0.14
USP34-222ENST00000498268 SAMD1Q6SPF0 538 aaPredicted RBP15.87■□□□□ 0.13
USP34-222ENST00000498268 MYCNP04198 464 aaPredicted RBP15.86■□□□□ 0.13
USP34-222ENST00000498268 FOXD4L1Q9NU39 408 aa15.83■□□□□ 0.12
USP34-222ENST00000498268 APLP2Q06481 763 aa15.82■□□□□ 0.12
USP34-222ENST00000498268 ABCB7O75027 752 aa15.81■□□□□ 0.12
USP34-222ENST00000498268 ZBTB22O15209 634 aa15.79■□□□□ 0.12
USP34-222ENST00000498268 ZNF219Q9P2Y4 722 aaPredicted RBP15.79■□□□□ 0.12
USP34-222ENST00000498268 ATF5Q9Y2D1 282 aaPredicted RBP15.66■□□□□ 0.1
USP34-222ENST00000498268 POLA2Q14181 598 aa15.55■□□□□ 0.08
USP34-222ENST00000498268 ATXN8OSP0DMR3 200 aa15.27■□□□□ 0.04
USP34-222ENST00000498268 CSRNP3Q8WYN3 585 aa15.2■□□□□ 0.02
USP34-222ENST00000498268 RBM42Q9BTD8 480 aaKnown RBP15.13■□□□□ 0.01
USP34-222ENST00000498268 ZBTB12Q9Y330 459 aaPredicted RBP15.07■□□□□ 0
USP34-222ENST00000498268 EHMT2Q96KQ7 1210 aa15.06■□□□□ 0
USP34-222ENST00000498268 POTEHQ6S545 545 aa15.03■□□□□ -0
USP34-222ENST00000498268 OSCARQ8IYS5 282 aa15.03■□□□□ -0
USP34-222ENST00000498268 MKRN4PQ13434 485 aaPredicted RBP14.92□□□□□ -0.02
USP34-222ENST00000498268 AKT1S1Q96B36 256 aa14.88□□□□□ -0.03
USP34-222ENST00000498268 FBLN2P98095 1184 aa14.83□□□□□ -0.04
USP34-222ENST00000498268 CHRDL2Q6WN34 429 aa14.83□□□□□ -0.04
USP34-222ENST00000498268 REM2Q8IYK8 340 aaPredicted RBP14.81□□□□□ -0.04
USP34-222ENST00000498268 SPDYE2BA6NHP3 402 aa14.69□□□□□ -0.06
USP34-222ENST00000498268 SPDYE6P0CI01 402 aa14.69□□□□□ -0.06
USP34-222ENST00000498268 SPDYE2Q495Y8 402 aa14.69□□□□□ -0.06
USP34-222ENST00000498268 PITPNM1O00562 1244 aa14.65□□□□□ -0.06
USP34-222ENST00000498268 ZNF692Q9BU19 519 aaPredicted RBP14.61□□□□□ -0.07
USP34-222ENST00000498268 SSUH2Q9Y2M2 353 aa14.58□□□□□ -0.08
USP34-222ENST00000498268 PIP4P2Q8N4L2 257 aa14.55□□□□□ -0.08
USP34-222ENST00000498268 FXR2P51116 673 aaKnown RBP eCLIP14.48□□□□□ -0.093e-10■□□□□ 8.1
USP34-222ENST00000498268 CLEC11AQ9Y240 323 aa14.43□□□□□ -0.1
USP34-222ENST00000498268 PABPN1Q86U42 306 aaKnown RBP eCLIP14.42□□□□□ -0.1
USP34-222ENST00000498268 SPDYE1Q8NFV5 336 aaPredicted RBP14.39□□□□□ -0.11
USP34-222ENST00000498268 PRKAR2AP13861 404 aaKnown RBP14.26□□□□□ -0.13
USP34-222ENST00000498268 SPDYE4A6NLX3 237 aa14.22□□□□□ -0.13
USP34-222ENST00000498268 HAX1O00165 279 aa14.22□□□□□ -0.13
USP34-222ENST00000498268 CHADLQ6NUI6 762 aa14.21□□□□□ -0.13
USP34-222ENST00000498268 EVX2Q03828 476 aa14.2□□□□□ -0.14
USP34-222ENST00000498268 PRR29P0C7W0 189 aa14.19□□□□□ -0.14
USP34-222ENST00000498268 SP7Q8TDD2 431 aaPredicted RBP14.15□□□□□ -0.14
USP34-222ENST00000498268 C19orf67A6NJJ6 358 aa14.01□□□□□ -0.17
USP34-222ENST00000498268 CREBZFQ9NS37 354 aa13.95□□□□□ -0.18
USP34-222ENST00000498268 FARP1Q9Y4F1 1045 aaPredicted RBP13.95□□□□□ -0.18
USP34-222ENST00000498268 STAG3Q9UJ98 1225 aa13.94□□□□□ -0.18
USP34-222ENST00000498268 PROM2Q8N271 834 aa13.91□□□□□ -0.18
USP34-222ENST00000498268 CD44P16070 742 aaKnown RBP13.8□□□□□ -0.2
USP34-222ENST00000498268 GABBR2O75899 941 aa13.79□□□□□ -0.2
USP34-222ENST00000498268 MNX1P50219 401 aaPredicted RBP13.75□□□□□ -0.21
USP34-222ENST00000498268 FKBP8Q14318 412 aa13.72□□□□□ -0.21
USP34-222ENST00000498268 ZRANB1Q9UGI0 708 aa13.65□□□□□ -0.22
USP34-222ENST00000498268 ZNF579Q8NAF0 562 aaKnown RBP13.58□□□□□ -0.24
USP34-222ENST00000498268 NPM1P06748 294 aaKnown RBP eCLIP13.57□□□□□ -0.24
USP34-222ENST00000498268 POTEIP0CG38 1075 aa13.56□□□□□ -0.24
USP34-222ENST00000498268 MIER1Q8N108 512 aa13.55□□□□□ -0.24
USP34-222ENST00000498268 PHF12Q96QT6 1004 aa13.52□□□□□ -0.25
USP34-222ENST00000498268 GALR2O43603 387 aaPredicted RBP13.48□□□□□ -0.25
USP34-222ENST00000498268 PAK3O75914 559 aaPredicted RBP13.46□□□□□ -0.25
USP34-222ENST00000498268 CLCN6P51797 869 aa13.44□□□□□ -0.26
USP34-222ENST00000498268 TSPYL2Q9H2G4 693 aaPredicted RBP13.44□□□□□ -0.26
USP34-222ENST00000498268 PLCD3Q8N3E9 789 aa13.42□□□□□ -0.26
USP34-222ENST00000498268 RASEFQ8IZ41 740 aa13.39□□□□□ -0.27
USP34-222ENST00000498268 PLEKHG5O94827 1062 aa13.37□□□□□ -0.27
USP34-222ENST00000498268 DCBLD2Q96PD2 775 aa13.37□□□□□ -0.27
USP34-222ENST00000498268 CCDC61Q9Y6R9 512 aa13.36□□□□□ -0.27
USP34-222ENST00000498268 MS4A3Q96HJ5 214 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1533 ms