Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 PLEC-210ENST00000527096 13713 ntAPPRIS ALT2 TSL 5 BASIC11.53□□□□□ -0.562e-6■■■□□ 15.6
NKRFO15226 PLEC-204ENST00000354958 14751 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.672e-6■■■□□ 15.6
NKRFO15226 PLEC-205ENST00000356346 14683 ntTSL 1 (best) BASIC10.85□□□□□ -0.672e-6■■■□□ 15.6
NKRFO15226 ARHGEF10L-205ENST00000466782 482 ntTSL 311.28□□□□□ -0.63e-6■■■□□ 15.6
NKRFO15226 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.652e-6■■■□□ 15.6
NKRFO15226 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.333e-7■■■□□ 15.5
NKRFO15226 E4F1-202ENST00000562589 817 ntTSL 528.95■■■□□ 2.223e-7■■■□□ 15.5
NKRFO15226 RELT-206ENST00000545687 586 ntTSL 426.22■■□□□ 1.793e-7■■■□□ 15.5
NKRFO15226 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.715e-7■■■□□ 15.5
NKRFO15226 RBM38-205ENST00000440234 686 ntTSL 2 BASIC25.63■■□□□ 1.693e-7■■■□□ 15.5
NKRFO15226 RBM38-201ENST00000342690 852 ntTSL 324.99■■□□□ 1.593e-7■■■□□ 15.5
NKRFO15226 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.443e-7■■■□□ 15.5
NKRFO15226 NLE1-206ENST00000589367 1017 ntTSL 523.28■■□□□ 1.323e-7■■■□□ 15.5
NKRFO15226 E4F1-207ENST00000565413 940 ntTSL 323.18■■□□□ 1.33e-7■■■□□ 15.5
NKRFO15226 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC23■■□□□ 1.273e-7■■■□□ 15.5
NKRFO15226 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC22.63■■□□□ 1.213e-7■■■□□ 15.5
NKRFO15226 SLC22A18-210ENST00000492567 684 ntTSL 222.5■■□□□ 1.195e-7■■■□□ 15.5
NKRFO15226 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.183e-7■■■□□ 15.5
NKRFO15226 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.063e-7■■■□□ 15.5
NKRFO15226 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.045e-7■■■□□ 15.5
NKRFO15226 RBM38-202ENST00000344785 2193 ntTSL 520.78■□□□□ 0.923e-7■■■□□ 15.5
NKRFO15226 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.855e-7■■■□□ 15.5
NKRFO15226 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.06■□□□□ 0.83e-7■■■□□ 15.5
NKRFO15226 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC19.25■□□□□ 0.675e-7■■■□□ 15.5
NKRFO15226 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.563e-7■■■□□ 15.5
NKRFO15226 NLE1-207ENST00000593176 800 ntTSL 318.31■□□□□ 0.523e-7■■■□□ 15.5
NKRFO15226 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.493e-7■■■□□ 15.5
NKRFO15226 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.11■□□□□ 0.493e-7■■■□□ 15.5
NKRFO15226 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.493e-7■■■□□ 15.5
NKRFO15226 E4F1-209ENST00000569796 5931 ntTSL 217.43■□□□□ 0.383e-7■■■□□ 15.5
NKRFO15226 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC17.03■□□□□ 0.323e-7■■■□□ 15.5
NKRFO15226 RBM38-204ENST00000371219 760 ntTSL 2 BASIC16.85■□□□□ 0.293e-7■■■□□ 15.5
NKRFO15226 NLE1-205ENST00000588642 580 ntTSL 215.7■□□□□ 0.13e-7■■■□□ 15.5
NKRFO15226 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.093e-7■■■□□ 15.5
NKRFO15226 HSPG2-203ENST00000374695 14327 ntAPPRIS P1 TSL 1 (best) BASIC8.4□□□□□ -1.062e-13■■■□□ 15.5
NKRFO15226 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC19.7■□□□□ 0.742e-8■■■□□ 15.5
NKRFO15226 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.324e-12■■■□□ 15.5
NKRFO15226 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC15.08■□□□□ 02e-8■■■□□ 15.5
NKRFO15226 TCAF1-202ENST00000392900 2513 ntTSL 214.25□□□□□ -0.132e-8■■■□□ 15.5
NKRFO15226 TCAF1-204ENST00000478172 576 ntTSL 412.44□□□□□ -0.422e-8■■■□□ 15.5
NKRFO15226 TCAF1-206ENST00000485416 577 ntTSL 411.59□□□□□ -0.552e-8■■■□□ 15.5
NKRFO15226 TCAF1-207ENST00000491908 634 ntTSL 211.52□□□□□ -0.572e-8■■■□□ 15.5
NKRFO15226 TCAF1-203ENST00000460532 840 ntTSL 211.28□□□□□ -0.62e-8■■■□□ 15.5
NKRFO15226 TCAF1-201ENST00000355951 3343 ntAPPRIS ALT1 TSL 1 (best) BASIC9.95□□□□□ -0.822e-8■■■□□ 15.5
NKRFO15226 TNS1-204ENST00000413554 1478 ntTSL 516.1■□□□□ 0.172e-6■■■□□ 15.5
NKRFO15226 TNS1-210ENST00000446903 2464 ntTSL 1 (best)15.38■□□□□ 0.052e-6■■■□□ 15.5
NKRFO15226 TNS1-214ENST00000479185 2513 ntTSL 514.12□□□□□ -0.152e-6■■■□□ 15.5
NKRFO15226 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.232e-6■■■□□ 15.5
NKRFO15226 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.232e-6■■■□□ 15.5
NKRFO15226 TNS1-220ENST00000611415 6509 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.472e-6■■■□□ 15.5
NKRFO15226 TNS1-221ENST00000615025 6488 ntTSL 5 BASIC11.42□□□□□ -0.582e-6■■■□□ 15.5
NKRFO15226 BCAR1-220ENST00000568864 556 ntTSL 416.88■□□□□ 0.293e-7■■■□□ 15.5
NKRFO15226 FAM169A-206ENST00000514200 751 ntTSL 421■□□□□ 0.959e-8■■■□□ 15.5
NKRFO15226 FAM169A-204ENST00000510609 5908 ntTSL 1 (best)14.05□□□□□ -0.169e-8■■■□□ 15.5
NKRFO15226 NECAB3-217ENST00000606106 591 ntTSL 422.73■■□□□ 1.236e-7■■■□□ 15.5
NKRFO15226 NECAB3-208ENST00000480994 732 ntTSL 519.59■□□□□ 0.736e-7■■■□□ 15.5
NKRFO15226 NFE2L2-203ENST00000421929 979 ntTSL 1 (best)24.33■■□□□ 1.492e-10■■■□□ 15.5
NKRFO15226 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.28■□□□□ 0.22e-10■■■□□ 15.5
NKRFO15226 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.859e-7■■■□□ 15.5
NKRFO15226 STK11-207ENST00000589152 3365 ntTSL 216.46■□□□□ 0.239e-7■■■□□ 15.5
NKRFO15226 PFKL-210ENST00000496824 1063 ntTSL 523.03■■□□□ 1.286e-7■■■□□ 15.5
NKRFO15226 TSPAN4-216ENST00000526055 469 ntTSL 221.41■■□□□ 1.021e-6■■■□□ 15.5
NKRFO15226 MKNK2-210ENST00000589534 454 ntTSL 231.05■■■□□ 2.566e-7■■■□□ 15.5
NKRFO15226 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC29■■■□□ 2.236e-7■■■□□ 15.5
NKRFO15226 MKNK2-205ENST00000586828 1503 ntTSL 222.43■■□□□ 1.186e-7■■■□□ 15.5
NKRFO15226 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC17.4■□□□□ 0.386e-7■■■□□ 15.5
NKRFO15226 MKNK2-209ENST00000589509 352 ntTSL 513.64□□□□□ -0.236e-7■■■□□ 15.5
NKRFO15226 MKNK2-213ENST00000591601 3582 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.336e-7■■■□□ 15.5
NKRFO15226 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC18.36■□□□□ 0.535e-7■■■□□ 15.4
NKRFO15226 INO80D-202ENST00000414320 753 ntTSL 312.61□□□□□ -0.396e-7■■■□□ 15.4
NKRFO15226 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.516e-7■■■□□ 15.4
NKRFO15226 PQLC1-211ENST00000590381 1247 ntTSL 2 BASIC33.49■■■□□ 2.952e-6■■■□□ 15.4
NKRFO15226 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC29.65■■■□□ 2.342e-6■■■□□ 15.4
NKRFO15226 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC29.17■■■□□ 2.262e-6■■■□□ 15.4
NKRFO15226 PQLC1-206ENST00000474967 2319 ntTSL 522.18■■□□□ 1.142e-6■■■□□ 15.4
NKRFO15226 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.148e-7■■■□□ 15.4
NKRFO15226 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC21.91■■□□□ 1.18e-7■■■□□ 15.4
NKRFO15226 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.67■□□□□ 0.98e-7■■■□□ 15.4
NKRFO15226 FAM45A-205ENST00000487888 851 ntTSL 218.46■□□□□ 0.555e-7■■■□□ 15.4
NKRFO15226 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.265e-7■■■□□ 15.4
NKRFO15226 FAM45A-208ENST00000493766 824 ntTSL 316.6■□□□□ 0.255e-7■■■□□ 15.4
NKRFO15226 FAM45A-209ENST00000497903 699 ntTSL 216.58■□□□□ 0.245e-7■■■□□ 15.4
NKRFO15226 FAM45A-202ENST00000448258 692 ntTSL 316.58■□□□□ 0.245e-7■■■□□ 15.4
NKRFO15226 FAM45A-204ENST00000472379 984 ntTSL 215.42■□□□□ 0.065e-7■■■□□ 15.4
NKRFO15226 ITGB5-208ENST00000483168 576 ntTSL 417.17■□□□□ 0.345e-9■■■□□ 15.4
NKRFO15226 ITGB5-204ENST00000465464 1164 ntTSL 514.27□□□□□ -0.135e-9■■■□□ 15.4
NKRFO15226 ITGB5-212ENST00000608657 825 ntTSL 310.03□□□□□ -0.85e-9■■■□□ 15.4
NKRFO15226 DBNL-204ENST00000432854 9618 ntTSL 511.81□□□□□ -0.521e-14■■■□□ 15.4
NKRFO15226 NUMBL-208ENST00000599594 393 ntTSL 527.73■■■□□ 2.033e-7■■■□□ 15.4
NKRFO15226 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.833e-7■■■□□ 15.4
NKRFO15226 NUMBL-204ENST00000595741 559 ntTSL 419.82■□□□□ 0.763e-7■■■□□ 15.4
NKRFO15226 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.313e-7■■■□□ 15.4
NKRFO15226 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.554e-6■■■□□ 15.4
NKRFO15226 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.354e-6■■■□□ 15.4
NKRFO15226 TMEM259-205ENST00000586704 2538 ntTSL 520.11■□□□□ 0.814e-6■■■□□ 15.4
NKRFO15226 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.493e-7■■■□□ 15.4
NKRFO15226 MOGAT3-202ENST00000379423 933 ntTSL 1 (best) BASIC17.4■□□□□ 0.383e-7■■■□□ 15.4
NKRFO15226 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.013e-7■■■□□ 15.4
NKRFO15226 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.133e-6■■■□□ 15.4
NKRFO15226 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC20.31■□□□□ 0.843e-6■■■□□ 15.4
Retrieved 100 of 9,198 protein–RNA pairs in 114.6 ms