Protein–RNA interactions for Protein: A0A1B0GX56

TRDV1, T-cell receptor delta variable 1 (Fragment), humanhuman

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRDV1A0A1B0GX56 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 RPS2P35-201ENST00000443417 897 ntBASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 AC007029.1-201ENST00000604183 313 ntBASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRDV1A0A1B0GX56 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRDV1A0A1B0GX56 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRDV1A0A1B0GX56 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRDV1A0A1B0GX56 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRDV1A0A1B0GX56 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRDV1A0A1B0GX56 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRDV1A0A1B0GX56 SSSCA1-AS1-201ENST00000567594 614 ntBASIC19.81■□□□□ 0.76
TRDV1A0A1B0GX56 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRDV1A0A1B0GX56 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRDV1A0A1B0GX56 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRDV1A0A1B0GX56 ALDH1A3-203ENST00000557963 1670 ntBASIC19.81■□□□□ 0.76
TRDV1A0A1B0GX56 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRDV1A0A1B0GX56 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
TRDV1A0A1B0GX56 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.8■□□□□ 0.76
TRDV1A0A1B0GX56 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRDV1A0A1B0GX56 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC19.8■□□□□ 0.76
TRDV1A0A1B0GX56 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRDV1A0A1B0GX56 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRDV1A0A1B0GX56 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRDV1A0A1B0GX56 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.8■□□□□ 0.76
TRDV1A0A1B0GX56 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRDV1A0A1B0GX56 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRDV1A0A1B0GX56 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRDV1A0A1B0GX56 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC19.79■□□□□ 0.76
TRDV1A0A1B0GX56 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
TRDV1A0A1B0GX56 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC19.79■□□□□ 0.76
TRDV1A0A1B0GX56 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRDV1A0A1B0GX56 AC016575.1-201ENST00000607026 382 ntBASIC19.79■□□□□ 0.76
TRDV1A0A1B0GX56 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
TRDV1A0A1B0GX56 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRDV1A0A1B0GX56 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC19.79■□□□□ 0.76
TRDV1A0A1B0GX56 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.79■□□□□ 0.76
TRDV1A0A1B0GX56 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC19.79■□□□□ 0.76
TRDV1A0A1B0GX56 GJD4-201ENST00000321660 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 HOMER3-201ENST00000221222 1384 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.78■□□□□ 0.76
TRDV1A0A1B0GX56 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 TCP1-202ENST00000392168 1878 ntTSL 5 BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.77■□□□□ 0.76
TRDV1A0A1B0GX56 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRDV1A0A1B0GX56 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRDV1A0A1B0GX56 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRDV1A0A1B0GX56 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRDV1A0A1B0GX56 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
TRDV1A0A1B0GX56 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRDV1A0A1B0GX56 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.76■□□□□ 0.75
TRDV1A0A1B0GX56 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRDV1A0A1B0GX56 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.76■□□□□ 0.75
TRDV1A0A1B0GX56 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 DISC1-220ENST00000602873 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC19.75■□□□□ 0.75
TRDV1A0A1B0GX56 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms