Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 KRTAP10-4-203ENST00000622352 1244 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 TRIM11-204ENST00000493030 5774 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 HSD17B4-222ENST00000515320 2494 ntTSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 GAP43-201ENST00000305124 1691 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 MPLKIP-201ENST00000306984 7668 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
SPASTQ9UBP0 DNASE1L2-204ENST00000567494 1301 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 TPRX1-202ENST00000535759 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 CNN1-201ENST00000252456 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 WNK1-201ENST00000315939 10452 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 MIR193BHG-211ENST00000641433 5365 ntBASIC14.16□□□□□ -0.14
SPASTQ9UBP0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 ZNF226-203ENST00000413984 716 ntTSL 3 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 CHCHD2P9-201ENST00000461726 456 ntBASIC14.16□□□□□ -0.14
SPASTQ9UBP0 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 AC092171.5-201ENST00000608012 942 ntBASIC14.16□□□□□ -0.14
SPASTQ9UBP0 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 AC011491.1-203ENST00000637688 543 ntBASIC14.16□□□□□ -0.14
SPASTQ9UBP0 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
SPASTQ9UBP0 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 P4HA1-205ENST00000440381 2790 ntTSL 3 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 EXOC6B-201ENST00000272427 5918 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 PPDPF-202ENST00000370179 868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 RPL17P11-201ENST00000417593 544 ntBASIC14.15□□□□□ -0.14
SPASTQ9UBP0 RPL7P35-201ENST00000446943 740 ntBASIC14.15□□□□□ -0.14
SPASTQ9UBP0 AC130709.1-201ENST00000484779 1212 ntBASIC14.15□□□□□ -0.14
SPASTQ9UBP0 PARP8-206ENST00000503665 572 ntTSL 4 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC14.15□□□□□ -0.14
SPASTQ9UBP0 AP002803.1-201ENST00000528836 498 ntBASIC14.15□□□□□ -0.14
SPASTQ9UBP0 AC005586.2-201ENST00000563946 837 ntBASIC14.15□□□□□ -0.14
SPASTQ9UBP0 WDR7-208ENST00000589935 544 ntTSL 4 BASIC14.15□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms