Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 CICP8-201ENST00000455800 2813 ntBASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 CIITA-213ENST00000618327 4657 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
TRIM48Q8IWZ4 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 WAPL-206ENST00000618527 6152 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 CAP2P1-201ENST00000557743 1390 ntBASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 WARS-203ENST00000358655 2466 ntTSL 2 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 KRT17P5-201ENST00000332088 839 ntBASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 BANF1P3-201ENST00000412556 261 ntBASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 RPSAP15-201ENST00000448168 861 ntBASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 AP000358.1-201ENST00000456260 156 ntBASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 LRRC75A-AS1-209ENST00000481027 1016 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 PHBP15-201ENST00000574228 665 ntBASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 LRRC75A-AS1-226ENST00000582911 879 ntTSL 5 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 C19orf25-205ENST00000588427 853 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 AC011498.6-201ENST00000592034 510 ntTSL 5 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 MEGF8-201ENST00000251268 9549 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 SF3A1-201ENST00000215793 5143 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 CICP17-201ENST00000418553 2377 ntBASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 FAM219A-203ENST00000379080 3591 ntTSL 2 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 AC090505.1-201ENST00000430515 1834 ntBASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRIM48Q8IWZ4 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 LYN-204ENST00000520220 5808 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 OR2I1P-208ENST00000641137 4948 ntBASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 STRCP1-201ENST00000509801 5328 ntBASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 AP001267.2-201ENST00000532619 2086 ntBASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 ZCCHC13-201ENST00000339534 842 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 OR2K2-202ENST00000374428 1038 ntBASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 GSTP1-201ENST00000398603 700 ntTSL 3 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 CEP164P1-201ENST00000455142 418 ntBASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 PGRMC2-206ENST00000512483 1144 ntTSL 5 BASIC13.96□□□□□ -0.17
TRIM48Q8IWZ4 PAGE3-202ENST00000519203 577 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms