Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PTF1AQ7RTS3 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 PGAP2-204ENST00000396991 1798 ntTSL 5 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 GAST-201ENST00000329402 470 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 SPTLC1P3-201ENST00000403408 259 ntBASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 APOBEC3B-204ENST00000407298 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 TXLNGY-202ENST00000407724 1000 ntTSL 3 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 AC000078.1-201ENST00000420617 682 ntBASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 DHRSX-IT1-201ENST00000437244 651 ntTSL 5 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 RN7SL47P-201ENST00000488710 299 ntBASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 AP001102.1-201ENST00000528959 409 ntBASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 METTL7AP1-201ENST00000547343 496 ntBASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 MIR5193-201ENST00000584510 109 ntBASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 LINC00337-201ENST00000429480 1302 ntTSL 2 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PTF1AQ7RTS3 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 DLX4-206ENST00000611342 1662 ntBASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 AC022532.1-201ENST00000624563 1728 ntBASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 COA6-201ENST00000366612 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 DUX4L31-201ENST00000446466 1136 ntBASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 AC004969.1-201ENST00000471553 578 ntTSL 5 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 AC008021.1-201ENST00000474180 414 ntBASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 RN7SL638P-201ENST00000494527 290 ntBASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 SCGB1A1-202ENST00000534397 466 ntTSL 3 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 LINC02130-201ENST00000566054 518 ntTSL 2 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 AC006547.1-209ENST00000596334 996 ntTSL 5 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 AC136475.7-201ENST00000602949 592 ntBASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 Metazoa_SRP.210-201ENST00000637921 244 ntBASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 CDIPT-AS1-203ENST00000638164 713 ntBASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 CPA1-207ENST00000484324 1303 ntTSL 5 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 AC093462.1-201ENST00000621167 1683 ntBASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
PTF1AQ7RTS3 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 USP39-207ENST00000450066 2086 ntTSL 2 BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 HIST2H2BE-201ENST00000369155 2194 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 RANGRF-201ENST00000226105 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 AL031577.1-201ENST00000339867 399 ntBASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 CASK-202ENST00000378158 3848 ntTSL 5 BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 HDHD5-AS1-202ENST00000431923 616 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 TULP3P1-202ENST00000453253 1291 ntBASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 AC019118.1-201ENST00000454530 435 ntTSL 3 BASIC17.6■□□□□ 0.41
PTF1AQ7RTS3 RN7SL22P-201ENST00000471800 269 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 70 ms