Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC13.12□□□□□ -0.31
H3F3CQ6NXT2 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3F3CQ6NXT2 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3F3CQ6NXT2 AMT-256ENST00000638063 1783 ntTSL 5 BASIC13.12□□□□□ -0.31
H3F3CQ6NXT2 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3F3CQ6NXT2 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
H3F3CQ6NXT2 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3F3CQ6NXT2 SLIT1-201ENST00000266058 7925 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
H3F3CQ6NXT2 AL022313.4-201ENST00000562756 2046 ntBASIC13.12□□□□□ -0.31
H3F3CQ6NXT2 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 MARC1-201ENST00000366910 7439 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 PCDHA9-202ENST00000532602 6293 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 OSBPL7-211ENST00000613735 2836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 RPL17P11-201ENST00000417593 544 ntBASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 MIR2392-201ENST00000584881 84 ntBASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 AL021707.6-201ENST00000609212 491 ntBASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 HIST1H4I-201ENST00000615353 1294 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 MIR7845-201ENST00000618396 99 ntBASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 AL356585.2-201ENST00000625078 2396 ntBASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 AC140479.7-201ENST00000636301 2332 ntBASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 LINC002481-201ENST00000499502 1821 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
H3F3CQ6NXT2 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 API5-208ENST00000531273 1868 ntTSL 2 BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 AL591122.2-201ENST00000624125 1853 ntBASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 KCTD7-201ENST00000275532 4795 ntTSL 4 BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 IL18BP-205ENST00000393705 1549 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 AC006372.4-201ENST00000624122 1543 ntBASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 CGB1-201ENST00000301407 573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 VPS29-201ENST00000360579 1091 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 PSMG4-203ENST00000380306 726 ntTSL 3 BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 AC145207.1-201ENST00000415556 691 ntTSL 4 BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 GUSBP10-201ENST00000417412 665 ntBASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 AL365295.1-203ENST00000435322 566 ntTSL 4 BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 AC098934.1-203ENST00000442868 1262 ntBASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 ERP29P1-201ENST00000442902 706 ntBASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 AL512330.1-201ENST00000456701 349 ntTSL 3 BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 RPL18AP3-201ENST00000462885 528 ntBASIC13.1□□□□□ -0.31
H3F3CQ6NXT2 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms