Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 FMO6P-201ENST00000236166 1620 ntBASIC12.37□□□□□ -0.43
FAM27BQ5VT28 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
FAM27BQ5VT28 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 DMBT1P1-203ENST00000636837 4628 ntBASIC12.36□□□□□ -0.43
FAM27BQ5VT28 ADAM33-201ENST00000350009 3480 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AC004554.1-201ENST00000422830 1468 ntBASIC12.36□□□□□ -0.43
FAM27BQ5VT28 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 UNC5B-202ENST00000373192 6451 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 VPS25-201ENST00000253794 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 SNORA50C-201ENST00000408535 133 ntBASIC12.36□□□□□ -0.43
FAM27BQ5VT28 ISCA2P1-201ENST00000425548 448 ntBASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AC006335.1-201ENST00000445200 547 ntBASIC12.36□□□□□ -0.43
FAM27BQ5VT28 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 PFN2-206ENST00000461930 606 ntTSL 4 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 NDUFB10P1-201ENST00000567319 521 ntBASIC12.36□□□□□ -0.43
FAM27BQ5VT28 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AC079336.7-201ENST00000623428 1078 ntBASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 SNORA50.1-201ENST00000628590 135 ntBASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AL139424.3-202ENST00000641619 917 ntBASIC12.36□□□□□ -0.43
FAM27BQ5VT28 LIMD1-202ENST00000440097 2773 ntTSL 5 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 AC002407.1-201ENST00000636668 3863 ntTSL 5 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 MAPK4-206ENST00000592595 4330 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
FAM27BQ5VT28 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.35□□□□□ -0.43
FAM27BQ5VT28 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
FAM27BQ5VT28 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
FAM27BQ5VT28 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM27BQ5VT28 SIGLEC9-201ENST00000250360 1690 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM27BQ5VT28 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM27BQ5VT28 AC135782.3-201ENST00000562782 2105 ntBASIC12.35□□□□□ -0.43
FAM27BQ5VT28 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM27BQ5VT28 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
FAM27BQ5VT28 AC087386.2-201ENST00000623212 4637 ntBASIC12.35□□□□□ -0.43
FAM27BQ5VT28 AC105206.1-202ENST00000314927 2368 ntBASIC12.35□□□□□ -0.43
FAM27BQ5VT28 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms