Protein–RNA interactions for Protein: Q08209

PPP3CA, Serine/threonine-protein phosphatase 2B catalytic subunit alpha isoform, humanhuman

Predictions only

Length 521 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP3CAQ08209 AC254562.2-201ENST00000428786 667 ntTSL 3 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PPP3CAQ08209 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 SLC25A15P3-201ENST00000505530 290 ntBASIC15.22■□□□□ 0.03
PPP3CAQ08209 ZNF419-208ENST00000518999 746 ntTSL 3 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PPP3CAQ08209 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PPP3CAQ08209 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 RN7SL574P-201ENST00000581512 297 ntBASIC15.22■□□□□ 0.03
PPP3CAQ08209 MIR4754-201ENST00000582477 89 ntBASIC15.22■□□□□ 0.03
PPP3CAQ08209 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 AC020922.3-201ENST00000595064 547 ntBASIC15.22■□□□□ 0.03
PPP3CAQ08209 IRF3-215ENST00000596822 823 ntTSL 3 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 AL133467.4-201ENST00000602953 725 ntBASIC15.22■□□□□ 0.03
PPP3CAQ08209 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 AP001505.2-201ENST00000616815 443 ntBASIC15.22■□□□□ 0.03
PPP3CAQ08209 PRKAB1-210ENST00000630317 258 ntTSL 2 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 KRT8P31-201ENST00000504812 1408 ntBASIC15.22■□□□□ 0.03
PPP3CAQ08209 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PPP3CAQ08209 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
PPP3CAQ08209 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PPP3CAQ08209 NXF1-201ENST00000294172 2346 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PPP3CAQ08209 APOBEC3D-202ENST00000427494 1961 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
PPP3CAQ08209 C16orf82-201ENST00000418886 2268 ntAPPRIS ALT2 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
PPP3CAQ08209 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
PPP3CAQ08209 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
PPP3CAQ08209 CYTH2-203ENST00000427476 4606 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 ABCD1P2-201ENST00000429313 1601 ntBASIC15.21■□□□□ 0.03
PPP3CAQ08209 LINC01229-201ENST00000561510 1494 ntTSL 5 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 MYO3A-201ENST00000265944 5581 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 TMEM181-201ENST00000367090 5390 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 TCP11L1-209ENST00000531632 1898 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 SERPINH1-205ENST00000525876 2283 ntTSL 2 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 OR2K2-202ENST00000374428 1038 ntBASIC15.21■□□□□ 0.03
PPP3CAQ08209 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 AC026320.2-201ENST00000434379 478 ntBASIC15.21■□□□□ 0.03
PPP3CAQ08209 MSRA-203ENST00000441698 788 ntTSL 2 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 Z97180.1-201ENST00000445173 988 ntBASIC15.21■□□□□ 0.03
PPP3CAQ08209 AC006335.1-201ENST00000445200 547 ntBASIC15.21■□□□□ 0.03
PPP3CAQ08209 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 LINC02435-201ENST00000508291 584 ntTSL 3 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 NDUFC1-209ENST00000539002 1198 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 NDUFC1-211ENST00000544855 1257 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 MIR3619-201ENST00000579667 83 ntBASIC15.21■□□□□ 0.03
PPP3CAQ08209 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 AC011825.3-201ENST00000583184 565 ntTSL 5 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 AC103810.3-201ENST00000583567 96 ntBASIC15.21■□□□□ 0.03
PPP3CAQ08209 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC15.21■□□□□ 0.03
PPP3CAQ08209 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 PPHLN1-206ENST00000395580 1693 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
PPP3CAQ08209 AL133338.1-201ENST00000565695 1517 ntBASIC15.21■□□□□ 0.03
PPP3CAQ08209 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PPP3CAQ08209 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PPP3CAQ08209 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PPP3CAQ08209 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.02
PPP3CAQ08209 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
PPP3CAQ08209 OPRL1-202ENST00000349451 3369 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PPP3CAQ08209 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PPP3CAQ08209 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PPP3CAQ08209 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
PPP3CAQ08209 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
PPP3CAQ08209 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
PPP3CAQ08209 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
PPP3CAQ08209 TRMT2B-203ENST00000372939 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PPP3CAQ08209 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PPP3CAQ08209 LINC00638-201ENST00000555578 2518 ntBASIC15.2■□□□□ 0.02
PPP3CAQ08209 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PPP3CAQ08209 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PPP3CAQ08209 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms