Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 TREML1-201ENST00000373127 1194 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 AL391647.1-201ENST00000395664 511 ntBASIC13.79□□□□□ -0.2
AP1S2P56377 RPS9P1-201ENST00000419943 583 ntBASIC13.79□□□□□ -0.2
AP1S2P56377 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S2P56377 CMC2-204ENST00000562713 573 ntTSL 3 BASIC13.79□□□□□ -0.2
AP1S2P56377 CMC2-209ENST00000565108 399 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S2P56377 AC020914.3-201ENST00000594712 304 ntBASIC13.79□□□□□ -0.2
AP1S2P56377 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S2P56377 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S2P56377 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
AP1S2P56377 NCOR2-204ENST00000405201 8533 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 CRACR2A-203ENST00000440314 2697 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
AP1S2P56377 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AP1S2P56377 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S2P56377 RNF14-201ENST00000347642 4213 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
AP1S2P56377 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC13.79□□□□□ -0.2
AP1S2P56377 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S2P56377 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC13.79□□□□□ -0.2
AP1S2P56377 TCOF1-207ENST00000504761 4467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
AP1S2P56377 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AP1S2P56377 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S2P56377 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC13.79□□□□□ -0.2
AP1S2P56377 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
AP1S2P56377 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
AP1S2P56377 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
AP1S2P56377 ZKSCAN7-201ENST00000273320 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP1S2P56377 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
AP1S2P56377 MORC4-202ENST00000355610 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 ERICH6-201ENST00000295910 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S2P56377 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
AP1S2P56377 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
AP1S2P56377 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
AP1S2P56377 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S2P56377 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 AC006987.1-201ENST00000413610 527 ntBASIC13.78□□□□□ -0.2
AP1S2P56377 PARVG-202ENST00000415224 999 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S2P56377 AC016700.1-201ENST00000429424 312 ntBASIC13.78□□□□□ -0.2
AP1S2P56377 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 DUX4L50-201ENST00000455245 715 ntBASIC13.78□□□□□ -0.2
AP1S2P56377 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC13.78□□□□□ -0.2
AP1S2P56377 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC13.78□□□□□ -0.2
AP1S2P56377 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC13.78□□□□□ -0.2
AP1S2P56377 HDDC2-204ENST00000608295 879 ntTSL 5 BASIC13.78□□□□□ -0.2
AP1S2P56377 MIR6869-201ENST00000619434 62 ntBASIC13.78□□□□□ -0.2
AP1S2P56377 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
AP1S2P56377 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 AC009474.1-201ENST00000455096 1565 ntBASIC13.78□□□□□ -0.2
AP1S2P56377 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
AP1S2P56377 AL157791.1-201ENST00000553667 1699 ntBASIC13.78□□□□□ -0.2
AP1S2P56377 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 DHCR24-201ENST00000371269 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
AP1S2P56377 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP1S2P56377 CDK11B-203ENST00000341832 2998 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP1S2P56377 PHYHIP-202ENST00000454243 3200 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
AP1S2P56377 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC13.77□□□□□ -0.2
AP1S2P56377 FBXO21-202ENST00000427718 4138 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
AP1S2P56377 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.2
AP1S2P56377 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S2P56377 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S2P56377 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S2P56377 RNF44-201ENST00000274811 4155 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S2P56377 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
AP1S2P56377 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms