Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 STK3-218ENST00000617590 2485 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFSF9P41273 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFSF9P41273 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFSF9P41273 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.22■□□□□ 0.03
TNFSF9P41273 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFSF9P41273 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
TNFSF9P41273 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.22■□□□□ 0.03
TNFSF9P41273 AL513211.1-201ENST00000429053 483 ntTSL 3 BASIC15.22■□□□□ 0.03
TNFSF9P41273 HLA-DPB2-205ENST00000435074 1188 ntBASIC15.22■□□□□ 0.03
TNFSF9P41273 AK2P2-201ENST00000439142 405 ntBASIC15.22■□□□□ 0.03
TNFSF9P41273 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 AL121845.1-201ENST00000447343 464 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFSF9P41273 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TNFSF9P41273 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
TNFSF9P41273 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 HERC2P11-201ENST00000562845 725 ntBASIC15.22■□□□□ 0.03
TNFSF9P41273 AC100756.2-201ENST00000569537 736 ntBASIC15.22■□□□□ 0.03
TNFSF9P41273 MIR4706-201ENST00000582134 82 ntBASIC15.22■□□□□ 0.03
TNFSF9P41273 MIR2392-201ENST00000584881 84 ntBASIC15.22■□□□□ 0.03
TNFSF9P41273 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC15.22■□□□□ 0.03
TNFSF9P41273 SMIM22-209ENST00000591870 355 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
TNFSF9P41273 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC15.22■□□□□ 0.03
TNFSF9P41273 AC018635.2-201ENST00000608625 364 ntBASIC15.22■□□□□ 0.03
TNFSF9P41273 AL031673.1-201ENST00000611460 466 ntBASIC15.22■□□□□ 0.03
TNFSF9P41273 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 FBXO46-201ENST00000317683 3001 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TNFSF9P41273 AC072061.1-201ENST00000569710 2234 ntBASIC15.22■□□□□ 0.03
TNFSF9P41273 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 TARBP2-202ENST00000394357 1402 ntTSL 3 BASIC15.22■□□□□ 0.03
TNFSF9P41273 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TNFSF9P41273 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 RIOK1-202ENST00000379834 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 AC093462.1-201ENST00000621167 1683 ntBASIC15.22■□□□□ 0.03
TNFSF9P41273 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
TNFSF9P41273 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
TNFSF9P41273 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFSF9P41273 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 BNIP1-201ENST00000231668 1339 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 PDXDC2P-206ENST00000534700 1315 ntBASIC15.21■□□□□ 0.03
TNFSF9P41273 ITSN1-212ENST00000399367 5722 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 AC005840.4-201ENST00000541242 2494 ntBASIC15.21■□□□□ 0.03
TNFSF9P41273 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFSF9P41273 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 STX3-207ENST00000633708 3111 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFSF9P41273 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFSF9P41273 Metazoa_SRP.4-201ENST00000366232 298 ntBASIC15.21■□□□□ 0.03
TNFSF9P41273 MAPK3-204ENST00000395200 997 ntTSL 3 BASIC15.21■□□□□ 0.03
TNFSF9P41273 RPL3P2-204ENST00000413027 1203 ntBASIC15.21■□□□□ 0.03
TNFSF9P41273 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 IDI2-AS1-201ENST00000420381 672 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC15.21■□□□□ 0.03
TNFSF9P41273 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFSF9P41273 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFSF9P41273 AC018638.5-201ENST00000450885 754 ntBASIC15.21■□□□□ 0.03
TNFSF9P41273 CD81-209ENST00000492627 886 ntTSL 3 BASIC15.21■□□□□ 0.03
TNFSF9P41273 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 AC010531.4-203ENST00000561709 660 ntTSL 3 BASIC15.21■□□□□ 0.03
TNFSF9P41273 MIR3180-2-201ENST00000581748 88 ntBASIC15.21■□□□□ 0.03
TNFSF9P41273 MIR4265-201ENST00000582152 99 ntBASIC15.21■□□□□ 0.03
TNFSF9P41273 AC087045.2-201ENST00000606279 1003 ntBASIC15.21■□□□□ 0.03
TNFSF9P41273 AC005618.3-201ENST00000624928 458 ntBASIC15.21■□□□□ 0.03
TNFSF9P41273 ARHGAP9-213ENST00000550288 2818 ntTSL 2 BASIC15.21■□□□□ 0.03
TNFSF9P41273 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.21■□□□□ 0.03
TNFSF9P41273 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
TNFSF9P41273 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC15.21■□□□□ 0.03
TNFSF9P41273 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TNFSF9P41273 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC15.21■□□□□ 0.02
TNFSF9P41273 FTX-216ENST00000638985 1367 ntTSL 5 BASIC15.21■□□□□ 0.02
TNFSF9P41273 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFSF9P41273 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFSF9P41273 UHRF1BP1L-201ENST00000279907 5168 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFSF9P41273 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFSF9P41273 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TNFSF9P41273 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
TNFSF9P41273 BRD1-205ENST00000457780 4997 ntTSL 5 BASIC15.21■□□□□ 0.02
TNFSF9P41273 AC019109.1-201ENST00000401725 1874 ntBASIC15.2■□□□□ 0.02
TNFSF9P41273 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms