Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 FLJ16779-201ENST00000612722 7638 ntBASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 INTS4P1-203ENST00000641008 3683 ntBASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 BARX1-AS1-201ENST00000453045 1445 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
DNMT3BQ9UBC3 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC14.65□□□□□ -0.07
DNMT3BQ9UBC3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC14.65□□□□□ -0.07
DNMT3BQ9UBC3 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 PAIP2-201ENST00000265192 1459 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 CCDC68-204ENST00000591504 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 MIR566-201ENST00000385187 94 ntBASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 ANG-202ENST00000397990 742 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 AC068057.1-201ENST00000453322 709 ntTSL 2 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 PFN2-212ENST00000490975 858 ntTSL 4 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 AC093300.1-201ENST00000510368 1201 ntBASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 FXYD6-FXYD2-201ENST00000532984 670 ntTSL 3 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 AL118516.1-201ENST00000564152 670 ntBASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 RN7SL556P-201ENST00000582856 298 ntBASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 PEBP1P2-201ENST00000603980 558 ntBASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 AC117503.4-201ENST00000623229 1418 ntBASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 HSPA8P5-201ENST00000456928 2069 ntBASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 INSC-205ENST00000525218 1576 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
DNMT3BQ9UBC3 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 AL359183.1-201ENST00000623796 2132 ntBASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 ARHGAP23P1-201ENST00000562773 1937 ntBASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 LCE2C-201ENST00000368783 614 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 USP17L6P-201ENST00000382470 1197 ntBASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 KRTAP10-5-201ENST00000400372 1150 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 AC073210.1-201ENST00000414799 232 ntBASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 IFI35-203ENST00000415816 1241 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 OR51A9P-201ENST00000422578 911 ntBASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 IFI35-204ENST00000438323 1232 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 AL355537.2-201ENST00000453367 375 ntTSL 2 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 SNHG17-208ENST00000456953 546 ntTSL 3 BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 BPIFB5P-201ENST00000457066 1099 ntBASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 CD300LF-206ENST00000464910 996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
DNMT3BQ9UBC3 AC063952.3-201ENST00000467756 308 ntBASIC14.63□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 76.7 ms