Protein–RNA interactions for Protein: Q9HAW4

CLSPN, Claspin, humanhuman

Predictions only

Length 1,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLSPNQ9HAW4 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 MINDY1-207ENST00000622754 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 RN7SKP214-201ENST00000364208 315 ntBASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 AC044849.1-201ENST00000519737 1188 ntBASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 Six3os1_5.1-201ENST00000611000 271 ntBASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 GNAI2-203ENST00000422163 2407 ntTSL 2 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 PAX2-202ENST00000361791 3193 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 CYB5D1-203ENST00000571846 1870 ntTSL 5 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 LHFPL1-201ENST00000371968 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CLSPNQ9HAW4 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 AC067931.2-201ENST00000623655 2003 ntBASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 NCR3-202ENST00000376071 541 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 NKG7-204ENST00000595217 816 ntTSL 2 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 AL645939.5-201ENST00000606834 243 ntBASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 AC004554.1-201ENST00000422830 1468 ntBASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CLSPNQ9HAW4 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 AC006987.1-201ENST00000413610 527 ntBASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 NKAIN1P1-201ENST00000435754 582 ntBASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 KRT33B-201ENST00000251646 1607 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CLSPNQ9HAW4 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 KRT8P43-201ENST00000406052 1458 ntBASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 AF013593.1-201ENST00000458074 1487 ntBASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC20.58■□□□□ 0.88
CLSPNQ9HAW4 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSPNQ9HAW4 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSPNQ9HAW4 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CLSPNQ9HAW4 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CLSPNQ9HAW4 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
CLSPNQ9HAW4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC20.57■□□□□ 0.88
CLSPNQ9HAW4 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.57■□□□□ 0.88
CLSPNQ9HAW4 NDUFB10P1-201ENST00000567319 521 ntBASIC20.57■□□□□ 0.88
CLSPNQ9HAW4 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
CLSPNQ9HAW4 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CLSPNQ9HAW4 HPN-206ENST00000597419 1212 ntTSL 5 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms