Protein–RNA interactions for Protein: Q6NUK4

REEP3, Receptor expression-enhancing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
REEP3Q6NUK4 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 SERPINA4-203ENST00000557004 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 AC005014.1-201ENST00000432006 2976 ntBASIC13.25□□□□□ -0.29
REEP3Q6NUK4 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 AC073869.1-201ENST00000415574 2762 ntBASIC13.25□□□□□ -0.29
REEP3Q6NUK4 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.25□□□□□ -0.29
REEP3Q6NUK4 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 PRAME-205ENST00000405655 2179 ntAPPRIS P2 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 TMEM130-203ENST00000416379 2881 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 LINC00115-201ENST00000473798 1317 ntBASIC13.24□□□□□ -0.29
REEP3Q6NUK4 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 KRT18P36-201ENST00000411618 1276 ntBASIC13.24□□□□□ -0.29
REEP3Q6NUK4 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 AC136604.1-202ENST00000425471 771 ntBASIC13.24□□□□□ -0.29
REEP3Q6NUK4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 HOXB-AS3-206ENST00000474040 741 ntTSL 3 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 USB1-203ENST00000539737 1212 ntTSL 2 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 AC007342.4-201ENST00000566383 584 ntTSL 4 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 CAND2-204ENST00000456430 4573 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 AL355102.3-201ENST00000554299 1678 ntBASIC13.24□□□□□ -0.29
REEP3Q6NUK4 NCOA7-203ENST00000392477 6457 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.24□□□□□ -0.29
REEP3Q6NUK4 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 MKRN5P-201ENST00000445263 1467 ntBASIC13.23□□□□□ -0.29
REEP3Q6NUK4 AC025183.3-201ENST00000623526 1482 ntBASIC13.23□□□□□ -0.29
REEP3Q6NUK4 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 POU2AF1-201ENST00000393067 3295 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 AL445250.1-201ENST00000641671 2259 ntBASIC13.23□□□□□ -0.29
REEP3Q6NUK4 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 KRTAP2-4-201ENST00000394015 764 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 NDUFAB1P1-201ENST00000404262 460 ntBASIC13.23□□□□□ -0.29
REEP3Q6NUK4 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 AC092580.1-201ENST00000433998 658 ntBASIC13.23□□□□□ -0.29
REEP3Q6NUK4 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 OR2R1P-201ENST00000441404 914 ntBASIC13.23□□□□□ -0.29
REEP3Q6NUK4 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 CTBP2P5-201ENST00000454986 1264 ntBASIC13.23□□□□□ -0.29
REEP3Q6NUK4 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.23□□□□□ -0.29
REEP3Q6NUK4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms