Protein–RNA interactions for Protein: P56750

CLDN17, Claudin-17, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN17P56750 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN17P56750 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN17P56750 PPP2R5E-201ENST00000337537 6659 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN17P56750 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CLDN17P56750 USP39-207ENST00000450066 2086 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN17P56750 ADGRL1-201ENST00000340736 7853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN17P56750 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN17P56750 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
CLDN17P56750 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN17P56750 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN17P56750 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
CLDN17P56750 LINC01165-201ENST00000445190 1623 ntBASIC12.69□□□□□ -0.38
CLDN17P56750 C9orf3-202ENST00000297979 2820 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN17P56750 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN17P56750 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN17P56750 ABCA17P-202ENST00000469908 4188 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CLDN17P56750 USP39-220ENST00000613444 2161 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN17P56750 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC12.69□□□□□ -0.38
CLDN17P56750 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.69□□□□□ -0.38
CLDN17P56750 TFCP2-201ENST00000257915 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN17P56750 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN17P56750 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN17P56750 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CLDN17P56750 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 TET3-201ENST00000305799 5174 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN17P56750 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN17P56750 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 CHRFAM7A-201ENST00000299847 6220 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 SUOX-201ENST00000266971 2364 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CLDN17P56750 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CLDN17P56750 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN17P56750 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CLDN17P56750 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 GPAA1P2-201ENST00000417923 928 ntBASIC12.68□□□□□ -0.38
CLDN17P56750 FNTAP2-201ENST00000430308 634 ntBASIC12.68□□□□□ -0.38
CLDN17P56750 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN17P56750 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN17P56750 TMEM198B-204ENST00000484016 896 ntBASIC12.68□□□□□ -0.38
CLDN17P56750 SCARNA20.5-201ENST00000516991 142 ntBASIC12.68□□□□□ -0.38
CLDN17P56750 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN17P56750 SDHD-202ENST00000525291 790 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN17P56750 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC12.68□□□□□ -0.38
CLDN17P56750 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CLDN17P56750 AL022334.2-201ENST00000610000 484 ntBASIC12.68□□□□□ -0.38
CLDN17P56750 AC100757.4-201ENST00000626934 759 ntBASIC12.68□□□□□ -0.38
CLDN17P56750 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CLDN17P56750 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN17P56750 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 SSTR5-AS1-204ENST00000569832 2864 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN17P56750 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
CLDN17P56750 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN17P56750 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.68□□□□□ -0.38
CLDN17P56750 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN17P56750 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CLDN17P56750 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 HIF3A-202ENST00000244303 2250 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN17P56750 KDM1B-201ENST00000297792 3811 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CLDN17P56750 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
CLDN17P56750 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC12.68□□□□□ -0.38
CLDN17P56750 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC12.68□□□□□ -0.38
CLDN17P56750 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CLDN17P56750 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN17P56750 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
CLDN17P56750 AMOTL2-212ENST00000514516 4521 ntTSL 2 BASIC12.67□□□□□ -0.38
CLDN17P56750 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN17P56750 CASC10-201ENST00000377113 3801 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN17P56750 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CLDN17P56750 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CLDN17P56750 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN17P56750 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN17P56750 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN17P56750 TUBBP5-203ENST00000508529 1334 ntBASIC12.67□□□□□ -0.38
CLDN17P56750 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN17P56750 MST1-202ENST00000449682 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN17P56750 AC138028.6-201ENST00000616106 1482 ntBASIC12.67□□□□□ -0.38
CLDN17P56750 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN17P56750 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN17P56750 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CLDN17P56750 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN17P56750 EIF4G1-219ENST00000435046 4668 ntTSL 5 BASIC12.67□□□□□ -0.38
CLDN17P56750 CAD-202ENST00000403525 6900 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CLDN17P56750 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms