Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 GLB1-203ENST00000399402 2512 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
CPS1P31327 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CPS1P31327 MIR766-201ENST00000390223 111 ntBASIC19.31■□□□□ 0.68
CPS1P31327 RPSAP61-201ENST00000412542 878 ntBASIC19.31■□□□□ 0.68
CPS1P31327 PLAC9P1-203ENST00000440031 223 ntBASIC19.31■□□□□ 0.68
CPS1P31327 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 NEMF-210ENST00000556672 590 ntTSL 2 BASIC19.31■□□□□ 0.68
CPS1P31327 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC19.31■□□□□ 0.68
CPS1P31327 TRPC5OS-203ENST00000635763 955 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
CPS1P31327 OR2A25-202ENST00000641441 1733 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
CPS1P31327 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 KRT37-201ENST00000225550 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 STK16-202ENST00000409260 1493 ntTSL 5 BASIC19.31■□□□□ 0.68
CPS1P31327 KRT8P25-201ENST00000473150 1456 ntBASIC19.31■□□□□ 0.68
CPS1P31327 LIMS4-204ENST00000632897 1460 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CPS1P31327 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC19.31■□□□□ 0.68
CPS1P31327 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 RAB8A-202ENST00000586682 1315 ntTSL 2 BASIC19.31■□□□□ 0.68
CPS1P31327 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CPS1P31327 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
CPS1P31327 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC19.31■□□□□ 0.68
CPS1P31327 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.31■□□□□ 0.68
CPS1P31327 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CPS1P31327 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CPS1P31327 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
CPS1P31327 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC19.31■□□□□ 0.68
CPS1P31327 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
CPS1P31327 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC19.3■□□□□ 0.68
CPS1P31327 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 ELFN1-AS1-201ENST00000415399 636 ntTSL 5 BASIC19.3■□□□□ 0.68
CPS1P31327 AC007279.1-201ENST00000448547 837 ntBASIC19.3■□□□□ 0.68
CPS1P31327 AC104115.1-201ENST00000484005 623 ntBASIC19.3■□□□□ 0.68
CPS1P31327 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC19.3■□□□□ 0.68
CPS1P31327 FAM213AP2-201ENST00000521579 683 ntBASIC19.3■□□□□ 0.68
CPS1P31327 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 FCRL1-207ENST00000491942 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC19.3■□□□□ 0.68
CPS1P31327 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 NR1H4-203ENST00000392986 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
CPS1P31327 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 DCDC2B-201ENST00000409358 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 ZFP28-201ENST00000301318 4096 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC19.3■□□□□ 0.68
CPS1P31327 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 MRPS12-202ENST00000402029 929 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 AC138392.1-201ENST00000427577 921 ntBASIC19.3■□□□□ 0.68
CPS1P31327 AC006001.2-202ENST00000439360 508 ntTSL 3 BASIC19.3■□□□□ 0.68
CPS1P31327 KRT127P-201ENST00000547183 433 ntBASIC19.3■□□□□ 0.68
CPS1P31327 AL137028.2-201ENST00000614601 256 ntBASIC19.3■□□□□ 0.68
CPS1P31327 AL158032.2-201ENST00000616818 195 ntBASIC19.3■□□□□ 0.68
CPS1P31327 AC010335.3-201ENST00000623767 531 ntBASIC19.3■□□□□ 0.68
CPS1P31327 CACNB4-201ENST00000201943 1389 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
CPS1P31327 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
CPS1P31327 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC19.3■□□□□ 0.68
CPS1P31327 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPS1P31327 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC19.29■□□□□ 0.68
CPS1P31327 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPS1P31327 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC19.29■□□□□ 0.68
CPS1P31327 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPS1P31327 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPS1P31327 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC19.29■□□□□ 0.68
CPS1P31327 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPS1P31327 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CPS1P31327 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPS1P31327 CRYGD-201ENST00000264376 619 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPS1P31327 CKS2-201ENST00000314355 613 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPS1P31327 LINC02036-201ENST00000415869 910 ntTSL 3 BASIC19.29■□□□□ 0.68
CPS1P31327 RPSAP16-201ENST00000447583 821 ntBASIC19.29■□□□□ 0.68
CPS1P31327 SPG20-AS1-203ENST00000493739 566 ntTSL 3 BASIC19.29■□□□□ 0.68
CPS1P31327 RN7SL638P-201ENST00000494527 290 ntBASIC19.29■□□□□ 0.68
CPS1P31327 LINC02507-201ENST00000509370 1028 ntTSL 3 BASIC19.29■□□□□ 0.68
CPS1P31327 PSME3-213ENST00000592169 826 ntTSL 3 BASIC19.29■□□□□ 0.68
CPS1P31327 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
CPS1P31327 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CPS1P31327 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC19.29■□□□□ 0.68
CPS1P31327 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
CPS1P31327 FMO6P-201ENST00000236166 1620 ntBASIC19.29■□□□□ 0.68
CPS1P31327 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC19.29■□□□□ 0.68
CPS1P31327 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
CPS1P31327 PIN4-203ENST00000373669 1321 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CPS1P31327 AC026271.1-201ENST00000447794 1348 ntBASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms