Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 TPM3-206ENST00000330188 2108 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 AC092810.1-201ENST00000429208 1224 ntBASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 VDAC1P1-201ENST00000439229 848 ntBASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 HLA-J-204ENST00000495278 958 ntBASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 AC126915.1-201ENST00000522847 1038 ntBASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 AC003686.1-201ENST00000550956 1034 ntBASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 AL136295.7-201ENST00000619226 1200 ntBASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 AL445984.1-201ENST00000637834 659 ntBASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 NYAP1-201ENST00000300179 3581 ntAPPRIS P1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 CDH1-213ENST00000612417 2068 ntTSL 5 BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 CNTNAP2-225ENST00000639247 2064 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PCDHB13Q9Y5F0 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.96■□□□□ 0.14
PCDHB13Q9Y5F0 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHB13Q9Y5F0 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHB13Q9Y5F0 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHB13Q9Y5F0 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHB13Q9Y5F0 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC15.96■□□□□ 0.14
PCDHB13Q9Y5F0 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.14
PCDHB13Q9Y5F0 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC15.96■□□□□ 0.14
PCDHB13Q9Y5F0 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 TUBB8P4-201ENST00000511806 1324 ntBASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 COL6A2-201ENST00000300527 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 PBX3-201ENST00000342287 2755 ntAPPRIS ALT1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 PTPRN-201ENST00000295718 3784 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 ACTBP11-201ENST00000436287 1126 ntBASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 AC104306.2-201ENST00000451877 341 ntBASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 GTF2H2C-215ENST00000514162 610 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 ABBA01031663.1-201ENST00000635630 790 ntBASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 CIC-207ENST00000575354 5473 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 FAM90A7P-201ENST00000382628 1395 ntBASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 FAM90A23P-201ENST00000400136 1395 ntBASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
PCDHB13Q9Y5F0 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB13Q9Y5F0 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
PCDHB13Q9Y5F0 CTSW-204ENST00000528419 1341 ntTSL 2 BASIC15.94■□□□□ 0.14
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms