Protein–RNA interactions for Protein: Q00975

CACNA1B, Voltage-dependent N-type calcium channel subunit alpha-1B, humanhuman

Predictions only

Length 2,339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1BQ00975 AC087163.1-201ENST00000430089 381 ntBASIC12.93□□□□□ -0.34
CACNA1BQ00975 SNHG11-211ENST00000444816 621 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 SNHG11-214ENST00000457218 880 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 VDAC1P11-201ENST00000458323 852 ntBASIC12.93□□□□□ -0.34
CACNA1BQ00975 IGKV3-11-201ENST00000483158 392 ntAPPRIS P1 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 IGHVIII-5-2-201ENST00000522505 261 ntBASIC12.93□□□□□ -0.34
CACNA1BQ00975 TINF2-210ENST00000559019 885 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 AL031058.1-201ENST00000561592 888 ntBASIC12.93□□□□□ -0.34
CACNA1BQ00975 MIR22HG-206ENST00000573127 899 ntTSL 3 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 AC005154.1-202ENST00000578293 999 ntTSL 5 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 AC007378.1-201ENST00000609765 478 ntBASIC12.93□□□□□ -0.34
CACNA1BQ00975 AC090386.2-201ENST00000623010 1039 ntBASIC12.93□□□□□ -0.34
CACNA1BQ00975 AC005906.2-208ENST00000638655 1286 ntTSL 5 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 TEAD1-207ENST00000638666 1281 ntAPPRIS P2 TSL 2 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 NME1-209ENST00000511355 1645 ntTSL 5 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 XRN1-203ENST00000463916 2075 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 CERCAM-214ENST00000613052 1429 ntTSL 5 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 TCAF2P1-201ENST00000291129 2421 ntBASIC12.93□□□□□ -0.34
CACNA1BQ00975 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 IFT22-210ENST00000517481 1657 ntTSL 2 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 KRT8P28-201ENST00000433288 1390 ntBASIC12.93□□□□□ -0.34
CACNA1BQ00975 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 RBP1-201ENST00000232219 898 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 CAMP-201ENST00000296435 745 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 TPM3-204ENST00000323144 1088 ntTSL 2 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 KLK8-203ENST00000347619 555 ntTSL 2 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 GSTK1-201ENST00000358406 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 LINP1-201ENST00000417112 917 ntTSL 2 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 AC079944.2-201ENST00000478867 734 ntBASIC12.93□□□□□ -0.34
CACNA1BQ00975 SNORA74.2-201ENST00000516496 180 ntBASIC12.93□□□□□ -0.34
CACNA1BQ00975 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 AC005096.1-201ENST00000560499 622 ntTSL 3 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 IGHV3OR16-11-201ENST00000565524 349 ntBASIC12.93□□□□□ -0.34
CACNA1BQ00975 AC136475.7-201ENST00000602949 592 ntBASIC12.93□□□□□ -0.34
CACNA1BQ00975 RBP1-206ENST00000617459 667 ntTSL 2 BASIC12.93□□□□□ -0.34
CACNA1BQ00975 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
CACNA1BQ00975 LINC01101-201ENST00000622953 1884 ntBASIC12.92□□□□□ -0.34
CACNA1BQ00975 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 TACC3-212ENST00000612220 1756 ntTSL 5 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 CALML6-201ENST00000307786 1101 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 DHRS7C-201ENST00000330255 1006 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 MRPL55-213ENST00000366740 644 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 RSPH1-202ENST00000398352 937 ntTSL 5 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 MLN-202ENST00000430124 566 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 AC009238.3-201ENST00000512705 217 ntBASIC12.92□□□□□ -0.34
CACNA1BQ00975 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 MIR4265-201ENST00000582152 99 ntBASIC12.92□□□□□ -0.34
CACNA1BQ00975 AC011306.1-201ENST00000606639 1275 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 Metazoa_SRP.180-201ENST00000612546 322 ntBASIC12.92□□□□□ -0.34
CACNA1BQ00975 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 AC069224.1-201ENST00000566372 1715 ntBASIC12.92□□□□□ -0.34
CACNA1BQ00975 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 AC015813.5-201ENST00000624641 1514 ntBASIC12.92□□□□□ -0.34
CACNA1BQ00975 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 NDFIP2-205ENST00000612570 4648 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
CACNA1BQ00975 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC12.92□□□□□ -0.34
CACNA1BQ00975 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC12.91□□□□□ -0.34
CACNA1BQ00975 GNLY-201ENST00000263863 846 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
CACNA1BQ00975 SPACA5-201ENST00000304355 648 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
CACNA1BQ00975 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms