Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
POLR3DP05423 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 KCNH4-201ENST00000264661 3920 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 WSCD1-201ENST00000317744 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 EVL-201ENST00000392920 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
POLR3DP05423 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC16.96■□□□□ 0.31
POLR3DP05423 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
POLR3DP05423 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC16.96■□□□□ 0.31
POLR3DP05423 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.96■□□□□ 0.31
POLR3DP05423 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC16.96■□□□□ 0.31
POLR3DP05423 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC16.96■□□□□ 0.31
POLR3DP05423 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC16.96■□□□□ 0.31
POLR3DP05423 DDN-201ENST00000421952 3749 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
POLR3DP05423 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC16.96■□□□□ 0.31
POLR3DP05423 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC16.96■□□□□ 0.31
POLR3DP05423 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.96■□□□□ 0.31
POLR3DP05423 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.96■□□□□ 0.31
POLR3DP05423 AC098935.1-201ENST00000446057 611 ntBASIC16.96■□□□□ 0.31
POLR3DP05423 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
POLR3DP05423 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.96■□□□□ 0.31
POLR3DP05423 RN7SL181P-201ENST00000462921 277 ntBASIC16.96■□□□□ 0.31
POLR3DP05423 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC16.96■□□□□ 0.31
POLR3DP05423 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC16.96■□□□□ 0.31
POLR3DP05423 AC242376.2-201ENST00000619355 883 ntBASIC16.96■□□□□ 0.31
POLR3DP05423 COX6A1P2-201ENST00000620597 330 ntBASIC16.96■□□□□ 0.31
POLR3DP05423 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC16.96■□□□□ 0.31
POLR3DP05423 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC16.96■□□□□ 0.31
POLR3DP05423 ZNF576-202ENST00000391965 1468 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
POLR3DP05423 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC16.96■□□□□ 0.31
POLR3DP05423 TTC39A-216ENST00000530004 1780 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
POLR3DP05423 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
POLR3DP05423 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
POLR3DP05423 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 MST1P2-201ENST00000457982 2291 ntBASIC16.95■□□□□ 0.3
POLR3DP05423 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
POLR3DP05423 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC16.95■□□□□ 0.3
POLR3DP05423 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 SOD2-202ENST00000367054 815 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR3DP05423 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 MIR645-201ENST00000385283 94 ntBASIC16.95■□□□□ 0.3
POLR3DP05423 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
POLR3DP05423 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.95■□□□□ 0.3
POLR3DP05423 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC16.95■□□□□ 0.3
POLR3DP05423 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
POLR3DP05423 AL512310.5-201ENST00000551999 515 ntBASIC16.95■□□□□ 0.3
POLR3DP05423 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC16.95■□□□□ 0.3
POLR3DP05423 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 AL031713.1-201ENST00000564813 661 ntBASIC16.95■□□□□ 0.3
POLR3DP05423 AC111170.1-201ENST00000591110 1132 ntTSL 3 BASIC16.95■□□□□ 0.3
POLR3DP05423 AC087045.2-201ENST00000606279 1003 ntBASIC16.95■□□□□ 0.3
POLR3DP05423 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
POLR3DP05423 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 GDF11-201ENST00000257868 8657 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 HSPA8P5-201ENST00000456928 2069 ntBASIC16.95■□□□□ 0.3
POLR3DP05423 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC16.95■□□□□ 0.3
POLR3DP05423 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.95■□□□□ 0.3
POLR3DP05423 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC16.95■□□□□ 0.3
POLR3DP05423 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
POLR3DP05423 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
POLR3DP05423 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.95■□□□□ 0.3
POLR3DP05423 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC16.94■□□□□ 0.3
POLR3DP05423 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
POLR3DP05423 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC16.94■□□□□ 0.3
POLR3DP05423 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
POLR3DP05423 AL022313.4-201ENST00000562756 2046 ntBASIC16.94■□□□□ 0.3
POLR3DP05423 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
POLR3DP05423 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR3DP05423 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR3DP05423 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
POLR3DP05423 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
POLR3DP05423 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC16.94■□□□□ 0.3
POLR3DP05423 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
POLR3DP05423 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms