Protein–RNA interactions for Protein: P04818

TYMS, Thymidylate synthase, humanhuman

Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TYMSP04818 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC10.98□□□□□ -0.65
TYMSP04818 PRPF40B-209ENST00000548825 3307 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
TYMSP04818 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 DLGAP3-201ENST00000235180 3587 ntAPPRIS P1 TSL 2 BASIC10.98□□□□□ -0.65
TYMSP04818 CLCNKB-202ENST00000375679 2567 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 HPS3-201ENST00000296051 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 CEP68-202ENST00000377990 5847 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 PLXNB1-201ENST00000296440 7143 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 XBP1-204ENST00000405219 1690 ntTSL 2 BASIC10.98□□□□□ -0.65
TYMSP04818 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC10.98□□□□□ -0.65
TYMSP04818 PTK7-205ENST00000352931 4023 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC10.98□□□□□ -0.65
TYMSP04818 TNNI1-201ENST00000336092 1750 ntAPPRIS P2 TSL 5 BASIC10.98□□□□□ -0.65
TYMSP04818 MSH5-204ENST00000375755 3094 ntAPPRIS P3 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 DPP9-214ENST00000598800 3098 ntTSL 5 BASIC10.98□□□□□ -0.65
TYMSP04818 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 ZBTB20-211ENST00000471418 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.98□□□□□ -0.65
TYMSP04818 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC10.97□□□□□ -0.65
TYMSP04818 AL357143.1-202ENST00000640531 5777 ntTSL 5 BASIC10.97□□□□□ -0.65
TYMSP04818 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC10.97□□□□□ -0.65
TYMSP04818 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 NCLN-201ENST00000246117 4005 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 SLC13A4-201ENST00000354042 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 PNMA5-204ENST00000452693 3113 ntAPPRIS P2 TSL 2 BASIC10.97□□□□□ -0.65
TYMSP04818 WDR66-202ENST00000397454 3420 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 ADAMTSL1-205ENST00000380548 8030 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TYMSP04818 LINC02188-202ENST00000569740 3775 ntTSL 4 BASIC10.97□□□□□ -0.65
TYMSP04818 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 AL139094.1-201ENST00000405549 1188 ntBASIC10.97□□□□□ -0.65
TYMSP04818 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC10.97□□□□□ -0.65
TYMSP04818 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC10.97□□□□□ -0.65
TYMSP04818 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC10.97□□□□□ -0.65
TYMSP04818 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 AC004890.2-204ENST00000481968 304 ntBASIC10.97□□□□□ -0.65
TYMSP04818 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC10.97□□□□□ -0.65
TYMSP04818 AC023310.3-201ENST00000557027 670 ntBASIC10.97□□□□□ -0.65
TYMSP04818 AC100756.1-201ENST00000562736 682 ntBASIC10.97□□□□□ -0.65
TYMSP04818 AC138749.3-201ENST00000567691 622 ntBASIC10.97□□□□□ -0.65
TYMSP04818 NFATC2IP-206ENST00000568148 1157 ntTSL 2 BASIC10.97□□□□□ -0.65
TYMSP04818 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC10.97□□□□□ -0.65
TYMSP04818 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC10.97□□□□□ -0.65
TYMSP04818 AP001160.2-201ENST00000596071 487 ntBASIC10.97□□□□□ -0.65
TYMSP04818 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC10.97□□□□□ -0.65
TYMSP04818 AL390955.2-201ENST00000603032 514 ntBASIC10.97□□□□□ -0.65
TYMSP04818 AC116165.1-201ENST00000611806 668 ntBASIC10.97□□□□□ -0.65
TYMSP04818 AC004790.1-201ENST00000612686 536 ntBASIC10.97□□□□□ -0.65
TYMSP04818 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC10.97□□□□□ -0.65
TYMSP04818 AC007431.3-201ENST00000623221 587 ntBASIC10.97□□□□□ -0.65
TYMSP04818 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC10.97□□□□□ -0.65
TYMSP04818 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC10.97□□□□□ -0.65
TYMSP04818 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC10.97□□□□□ -0.65
TYMSP04818 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC10.97□□□□□ -0.65
TYMSP04818 CXCR5-201ENST00000292174 4431 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 PRAMEF25-201ENST00000614839 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 PRAMEF26-201ENST00000624207 1863 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 ATF4-203ENST00000404241 1910 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TYMSP04818 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC10.97□□□□□ -0.65
TYMSP04818 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 NRP2-202ENST00000357118 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC10.97□□□□□ -0.65
TYMSP04818 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC10.97□□□□□ -0.65
TYMSP04818 TBL1X-203ENST00000407597 5596 ntTSL 2 BASIC10.97□□□□□ -0.65
TYMSP04818 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TYMSP04818 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC10.96□□□□□ -0.65
TYMSP04818 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TYMSP04818 CACNG3-201ENST00000005284 3088 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TYMSP04818 KCNJ11-201ENST00000339994 2801 ntAPPRIS P1 BASIC10.96□□□□□ -0.65
TYMSP04818 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC10.96□□□□□ -0.65
TYMSP04818 NR4A1-201ENST00000243050 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TYMSP04818 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TYMSP04818 SLC8A3-205ENST00000394330 2622 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TYMSP04818 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC10.96□□□□□ -0.65
TYMSP04818 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC10.96□□□□□ -0.65
TYMSP04818 INTS4P2-202ENST00000614726 2019 ntBASIC10.96□□□□□ -0.65
TYMSP04818 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
TYMSP04818 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC10.96□□□□□ -0.65
TYMSP04818 AC108024.1-201ENST00000626286 1721 ntBASIC10.96□□□□□ -0.65
TYMSP04818 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
TYMSP04818 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Retrieved 100 of 98,524 protein–RNA pairs in 71.6 ms